Protein–RNA interactions for Protein: P40985

HUL4, Probable E3 ubiquitin-protein ligase HUL4, yeastyeast

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HUL4P40985 NIP1YMR309C 2439 nt0.94□□□□□ -2.26
HUL4P40985 YOR192C-BYOR192C-B 5313 nt0.88□□□□□ -2.27
HUL4P40985 PET111YMR257C 2403 nt0.88□□□□□ -2.27
HUL4P40985 RPS26AYGL189C 360 nt0.86□□□□□ -2.27
HUL4P40985 IQG1YPL242C 4488 nt0.85□□□□□ -2.27
HUL4P40985 YDR371C-AYDR371C-A 105 nt0.84□□□□□ -2.27
HUL4P40985 PMP2YEL017C-A 132 nt0.83□□□□□ -2.28
HUL4P40985 YNL266WYNL266W 420 nt0.83□□□□□ -2.28
HUL4P40985 RCO1YMR075W 2055 nt0.83□□□□□ -2.28
HUL4P40985 CSE1YGL238W 2883 nt0.81□□□□□ -2.28
HUL4P40985 tT(AGU)BtT(AGU)B 73 nt0.81□□□□□ -2.28
HUL4P40985 tT(AGU)CtT(AGU)C 73 nt0.81□□□□□ -2.28
HUL4P40985 tT(AGU)DtT(AGU)D 73 nt0.81□□□□□ -2.28
HUL4P40985 tT(AGU)HtT(AGU)H 73 nt0.81□□□□□ -2.28
HUL4P40985 tT(AGU)I1tT(AGU)I1 73 nt0.81□□□□□ -2.28
HUL4P40985 tT(AGU)I2tT(AGU)I2 73 nt0.81□□□□□ -2.28
HUL4P40985 tT(AGU)JtT(AGU)J 73 nt0.81□□□□□ -2.28
HUL4P40985 tT(AGU)N1tT(AGU)N1 73 nt0.81□□□□□ -2.28
HUL4P40985 tT(AGU)N2tT(AGU)N2 73 nt0.81□□□□□ -2.28
HUL4P40985 tT(AGU)O1tT(AGU)O1 73 nt0.81□□□□□ -2.28
HUL4P40985 tT(AGU)O2tT(AGU)O2 73 nt0.81□□□□□ -2.28
HUL4P40985 YNL103W-AYNL103W-A 90 nt0.81□□□□□ -2.28
HUL4P40985 MLP1YKR095W 5628 nt0.81□□□□□ -2.28
HUL4P40985 YPR159C-AYPR159C-A 102 nt0.79□□□□□ -2.28
HUL4P40985 AI1Q0050 2505 nt0.78□□□□□ -2.28
HUL4P40985 SEC10YLR166C 2616 nt0.76□□□□□ -2.29
HUL4P40985 THO2YNL139C 4794 nt0.75□□□□□ -2.29
HUL4P40985 ORC3YLL004W 1851 nt0.75□□□□□ -2.29
HUL4P40985 YBR178WYBR178W 375 nt0.74□□□□□ -2.29
HUL4P40985 YBL100W-BYBL100W-B 5313 nt0.73□□□□□ -2.29
HUL4P40985 snR61snR61 90 nt0.73□□□□□ -2.29
HUL4P40985 snR69snR69 101 nt0.72□□□□□ -2.29
HUL4P40985 TFB5YDR079C-A 219 nt0.72□□□□□ -2.29
HUL4P40985 EST1YLR233C 2100 nt0.71□□□□□ -2.3
HUL4P40985 SBH1YER087C-B 249 nt0.71□□□□□ -2.3
HUL4P40985 YJL077W-AYJL077W-A 87 nt0.69□□□□□ -2.3
HUL4P40985 YBR196C-AYBR196C-A 150 nt0.68□□□□□ -2.3
HUL4P40985 FMP27YLR454W 7887 nt0.68□□□□□ -2.3
HUL4P40985 YBL109WYBL109W 336 nt0.67□□□□□ -2.3
HUL4P40985 YNL054W-BYNL054W-B 5250 nt0.66□□□□□ -2.3
HUL4P40985 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
HUL4P40985 tD(GUC)QtD(GUC)Q 75 nt0.65□□□□□ -2.31
HUL4P40985 YGL041C-BYGL041C-B 183 nt0.63□□□□□ -2.31
HUL4P40985 YMR326CYMR326C 309 nt0.63□□□□□ -2.31
HUL4P40985 YDR524C-AYDR524C-A 120 nt0.62□□□□□ -2.31
HUL4P40985 RDS3YPR094W 324 nt0.62□□□□□ -2.31
HUL4P40985 UTP10YJL109C 5310 nt0.61□□□□□ -2.31
HUL4P40985 YER078W-AYER078W-A 165 nt0.6□□□□□ -2.31
HUL4P40985 MLP2YIL149C 5040 nt0.6□□□□□ -2.31
HUL4P40985 snR81snR81 201 nt0.59□□□□□ -2.31
HUL4P40985 YHR217CYHR217C 462 nt0.57□□□□□ -2.32
HUL4P40985 YAL037C-AYAL037C-A 93 nt0.57□□□□□ -2.32
HUL4P40985 YLR286W-AYLR286W-A 135 nt0.56□□□□□ -2.32
HUL4P40985 YOR186C-AYOR186C-A 210 nt0.55□□□□□ -2.32
HUL4P40985 YOL083C-AYOL083C-A 141 nt0.52□□□□□ -2.33
HUL4P40985 YBL071C-BYBL071C-B 99 nt0.51□□□□□ -2.33
HUL4P40985 ESP1YGR098C 4893 nt0.5□□□□□ -2.33
HUL4P40985 YDL159C-BYDL159C-B 177 nt0.5□□□□□ -2.33
HUL4P40985 tQ(UUG)QtQ(UUG)Q 76 nt0.48□□□□□ -2.33
HUL4P40985 YLR299C-AYLR299C-A 93 nt0.46□□□□□ -2.34
HUL4P40985 YER090C-AYER090C-A 90 nt0.43□□□□□ -2.34
HUL4P40985 tS(GCU)Q1tS(GCU)Q1 86 nt0.43□□□□□ -2.34
HUL4P40985 SOV1YMR066W 2697 nt0.41□□□□□ -2.34
HUL4P40985 YOL164W-AYOL164W-A 183 nt0.39□□□□□ -2.35
HUL4P40985 YOL013W-AYOL013W-A 192 nt0.37□□□□□ -2.35
HUL4P40985 snR50snR50 90 nt0.37□□□□□ -2.35
HUL4P40985 snR62snR62 100 nt0.31□□□□□ -2.36
HUL4P40985 YGR240C-AYGR240C-A 201 nt0.31□□□□□ -2.36
HUL4P40985 YDL247W-AYDL247W-A 75 nt0.3□□□□□ -2.36
HUL4P40985 YML054C-AYML054C-A 159 nt0.3□□□□□ -2.36
HUL4P40985 YBL100W-CYBL100W-C 120 nt0.3□□□□□ -2.36
HUL4P40985 snR47snR47 99 nt0.26□□□□□ -2.37
HUL4P40985 YHR180C-BYHR180C-B 105 nt0.25□□□□□ -2.37
HUL4P40985 YLL066W-BYLL066W-B 171 nt0.21□□□□□ -2.38
HUL4P40985 YML100W-AYML100W-A 174 nt0.21□□□□□ -2.38
HUL4P40985 snR45snR45 172 nt0.21□□□□□ -2.38
HUL4P40985 snR67snR67 82 nt0.2□□□□□ -2.38
HUL4P40985 YDR034C-AYDR034C-A 177 nt0.2□□□□□ -2.38
HUL4P40985 YBR109W-AYBR109W-A 225 nt0.19□□□□□ -2.38
HUL4P40985 snR128snR128 126 nt0.16□□□□□ -2.38
HUL4P40985 RPL41AYDL184C 78 nt0.12□□□□□ -2.39
HUL4P40985 YBR296C-AYBR296C-A 120 nt0.12□□□□□ -2.39
HUL4P40985 snR38snR38 95 nt0.11□□□□□ -2.39
HUL4P40985 SKI7YOR076C 2244 nt0.05□□□□□ -2.4
HUL4P40985 YKL225WYKL225W 348 nt0.03□□□□□ -2.4
HUL4P40985 PAU9YBL108C-A 129 nt-0.02□□□□□ -2.41
HUL4P40985 snR64snR64 101 nt-0.07□□□□□ -2.42
HUL4P40985 SBH2YER019C-A 267 nt-0.09□□□□□ -2.42
HUL4P40985 YJL113WYJL113W 4647 nt-0.1□□□□□ -2.43
HUL4P40985 tA(UGC)QtA(UGC)Q 76 nt-0.13□□□□□ -2.43
HUL4P40985 YKL106C-AYKL106C-A 120 nt-0.2□□□□□ -2.44
HUL4P40985 snR53snR53 91 nt-0.21□□□□□ -2.44
HUL4P40985 YOR376W-AYOR376W-A 156 nt-0.24□□□□□ -2.45
HUL4P40985 snR161snR161 161 nt-0.25□□□□□ -2.45
HUL4P40985 YDL159W-AYDL159W-A 132 nt-0.26□□□□□ -2.45
HUL4P40985 YGR122C-AYGR122C-A 129 nt-0.35□□□□□ -2.47
HUL4P40985 YOR316C-AYOR316C-A 210 nt-0.35□□□□□ -2.47
HUL4P40985 snR33snR33 183 nt-0.38□□□□□ -2.47
HUL4P40985 URB1YKL014C 5295 nt-0.39□□□□□ -2.47
HUL4P40985 YNR077CYNR077C 255 nt-0.39□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 218.5 ms