Protein–RNA interactions for Protein: P40414

TPM2, Tropomyosin-2, yeastyeast

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPM2P40414 YPL060C-AYPL060C-A 3315 nt-0.03□□□□□ -2.41
TPM2P40414 YDR406W-AYDR406W-A 246 nt-0.04□□□□□ -2.42
TPM2P40414 snR128snR128 126 nt-0.06□□□□□ -2.42
TPM2P40414 YMR046W-AYMR046W-A 129 nt-0.08□□□□□ -2.42
TPM2P40414 YJL077W-AYJL077W-A 87 nt-0.1□□□□□ -2.43
TPM2P40414 YGR146C-AYGR146C-A 162 nt-0.11□□□□□ -2.43
TPM2P40414 snR39BsnR39B 96 nt-0.11□□□□□ -2.43
TPM2P40414 snR48snR48 113 nt-0.11□□□□□ -2.43
TPM2P40414 YOR329W-AYOR329W-A 210 nt-0.14□□□□□ -2.43
TPM2P40414 SPG3YDR504C 384 nt-0.15□□□□□ -2.43
TPM2P40414 tM(CAU)Q1tM(CAU)Q1 76 nt-0.22□□□□□ -2.44
TPM2P40414 YHL015W-AYHL015W-A 84 nt-0.24□□□□□ -2.45
TPM2P40414 YGR164WYGR164W 336 nt-0.25□□□□□ -2.45
TPM2P40414 JLP2YMR132C 627 nt-0.25□□□□□ -2.45
TPM2P40414 YOR102WYOR102W 351 nt-0.27□□□□□ -2.45
TPM2P40414 snR69snR69 101 nt-0.28□□□□□ -2.45
TPM2P40414 TFB5YDR079C-A 219 nt-0.28□□□□□ -2.45
TPM2P40414 YDL007C-AYDL007C-A 258 nt-0.29□□□□□ -2.46
TPM2P40414 PMP2YEL017C-A 132 nt-0.32□□□□□ -2.46
TPM2P40414 tL(UAA)QtL(UAA)Q 85 nt-0.32□□□□□ -2.46
TPM2P40414 tQ(UUG)QtQ(UUG)Q 76 nt-0.32□□□□□ -2.46
TPM2P40414 YJL150WYJL150W 303 nt-0.34□□□□□ -2.46
TPM2P40414 YNL067W-BYNL067W-B 141 nt-0.34□□□□□ -2.46
TPM2P40414 SBH2YER019C-A 267 nt-0.36□□□□□ -2.47
TPM2P40414 YNL205CYNL205C 423 nt-0.36□□□□□ -2.47
TPM2P40414 MYO1YHR023W 5787 nt-0.38□□□□□ -2.47
TPM2P40414 RDS3YPR094W 324 nt-0.38□□□□□ -2.47
TPM2P40414 YML100W-AYML100W-A 174 nt-0.44□□□□□ -2.48
TPM2P40414 YER090C-AYER090C-A 90 nt-0.47□□□□□ -2.48
TPM2P40414 YNL198CYNL198C 303 nt-0.47□□□□□ -2.48
TPM2P40414 SEC10YLR166C 2616 nt-0.48□□□□□ -2.49
TPM2P40414 tD(GUC)QtD(GUC)Q 75 nt-0.5□□□□□ -2.49
TPM2P40414 YIL071W-AYIL071W-A 477 nt-0.53□□□□□ -2.49
TPM2P40414 YJL113WYJL113W 4647 nt-0.58□□□□□ -2.5
TPM2P40414 YLR286W-AYLR286W-A 135 nt-0.62□□□□□ -2.51
TPM2P40414 YNL266WYNL266W 420 nt-0.62□□□□□ -2.51
TPM2P40414 YBR178WYBR178W 375 nt-0.63□□□□□ -2.51
TPM2P40414 snR50snR50 90 nt-0.63□□□□□ -2.51
TPM2P40414 YLR466C-BYLR466C-B 117 nt-0.65□□□□□ -2.51
TPM2P40414 YDL159C-BYDL159C-B 177 nt-0.67□□□□□ -2.52
TPM2P40414 PAU9YBL108C-A 129 nt-0.67□□□□□ -2.52
TPM2P40414 tA(UGC)QtA(UGC)Q 76 nt-0.68□□□□□ -2.52
TPM2P40414 YBL053WYBL053W 375 nt-0.68□□□□□ -2.52
TPM2P40414 YGR151CYGR151C 336 nt-0.69□□□□□ -2.52
TPM2P40414 SOM1YEL059C-A 225 nt-0.71□□□□□ -2.52
TPM2P40414 YCR095W-AYCR095W-A 159 nt-0.72□□□□□ -2.52
TPM2P40414 YBR196C-AYBR196C-A 150 nt-0.72□□□□□ -2.52
TPM2P40414 URB1YKL014C 5295 nt-0.74□□□□□ -2.53
TPM2P40414 snR67snR67 82 nt-0.76□□□□□ -2.53
TPM2P40414 YNL337WYNL337W 255 nt-0.76□□□□□ -2.53
TPM2P40414 YHL009W-BYHL009W-B 5409 nt-0.78□□□□□ -2.53
TPM2P40414 YLR299C-AYLR299C-A 93 nt-0.82□□□□□ -2.54
TPM2P40414 YNL338WYNL338W 159 nt-0.87□□□□□ -2.55
TPM2P40414 Q0032Q0032 291 nt-0.9□□□□□ -2.55
TPM2P40414 YGL007C-AYGL007C-A 87 nt-1.04□□□□□ -2.58
TPM2P40414 SKI7YOR076C 2244 nt-1.05□□□□□ -2.58
TPM2P40414 YCL001W-BYCL001W-B 255 nt-1.1□□□□□ -2.59
TPM2P40414 YML054C-AYML054C-A 159 nt-1.14□□□□□ -2.59
TPM2P40414 YHR180C-BYHR180C-B 105 nt-1.15□□□□□ -2.59
TPM2P40414 tT(UGU)G1tT(UGU)G1 72 nt-1.19□□□□□ -2.6
TPM2P40414 tT(UGU)G2tT(UGU)G2 72 nt-1.19□□□□□ -2.6
TPM2P40414 tT(UGU)PtT(UGU)P 72 nt-1.19□□□□□ -2.6
TPM2P40414 snR33snR33 183 nt-1.2□□□□□ -2.6
TPM2P40414 snR161snR161 161 nt-1.22□□□□□ -2.6
TPM2P40414 YOL083C-AYOL083C-A 141 nt-1.37□□□□□ -2.63
TPM2P40414 YAL037C-AYAL037C-A 93 nt-1.4□□□□□ -2.63
TPM2P40414 YBL071C-BYBL071C-B 99 nt-1.43□□□□□ -2.64
TPM2P40414 YOR225WYOR225W 330 nt-1.43□□□□□ -2.64
TPM2P40414 YLR294CYLR294C 330 nt-1.46□□□□□ -2.64
TPM2P40414 YNR077CYNR077C 255 nt-1.46□□□□□ -2.64
TPM2P40414 YBR296C-AYBR296C-A 120 nt-1.49□□□□□ -2.65
TPM2P40414 RPL41AYDL184C 78 nt-1.5□□□□□ -2.65
TPM2P40414 YOL164W-AYOL164W-A 183 nt-1.5□□□□□ -2.65
TPM2P40414 YBL100W-CYBL100W-C 120 nt-1.55□□□□□ -2.66
TPM2P40414 YBR109W-AYBR109W-A 225 nt-1.55□□□□□ -2.66
TPM2P40414 YBR223W-AYBR223W-A 120 nt-1.57□□□□□ -2.66
TPM2P40414 snR81snR81 201 nt-1.58□□□□□ -2.66
TPM2P40414 YOR376W-AYOR376W-A 156 nt-1.6□□□□□ -2.67
TPM2P40414 YKL106C-AYKL106C-A 120 nt-1.63□□□□□ -2.67
TPM2P40414 snR47snR47 99 nt-1.69□□□□□ -2.68
TPM2P40414 YGR240C-AYGR240C-A 201 nt-1.7□□□□□ -2.68
TPM2P40414 YNL170WYNL170W 396 nt-1.71□□□□□ -2.68
TPM2P40414 YOR316C-AYOR316C-A 210 nt-1.73□□□□□ -2.69
TPM2P40414 tP(UGG)QtP(UGG)Q 72 nt-1.76□□□□□ -2.69
TPM2P40414 snR38snR38 95 nt-1.76□□□□□ -2.69
TPM2P40414 snR61snR61 90 nt-1.78□□□□□ -2.69
TPM2P40414 YGL041C-BYGL041C-B 183 nt-1.82□□□□□ -2.7
TPM2P40414 YNL103W-AYNL103W-A 90 nt-1.83□□□□□ -2.7
TPM2P40414 CDC65tQ(CUG)M 72 nt-1.84□□□□□ -2.7
TPM2P40414 snR77snR77 88 nt-1.87□□□□□ -2.71
TPM2P40414 ATP8Q0080 147 nt-1.92□□□□□ -2.72
TPM2P40414 tS(GCU)Q1tS(GCU)Q1 86 nt-2.04□□□□□ -2.74
TPM2P40414 YKL225WYKL225W 348 nt-2.04□□□□□ -2.74
TPM2P40414 YMR315W-AYMR315W-A 108 nt-2.09□□□□□ -2.74
TPM2P40414 snR62snR62 100 nt-2.14□□□□□ -2.75
TPM2P40414 YDR034C-AYDR034C-A 177 nt-2.15□□□□□ -2.75
TPM2P40414 tY(GUA)QtY(GUA)Q 84 nt-2.29□□□□□ -2.78
TPM2P40414 Q0092Q0092 141 nt-2.31□□□□□ -2.78
TPM2P40414 Q0143Q0143 153 nt-2.39□□□□□ -2.79
TPM2P40414 YDL114W-AYDL114W-A 114 nt-2.45□□□□□ -2.8
Retrieved 100 of 7,029 protein–RNA pairs in 44.9 ms