Protein–RNA interactions for Protein: P39520

IFH1, Protein IFH1, yeastyeast

Predictions only

Length 1,085 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IFH1P39520 tH(GUG)G1tH(GUG)G1 72 nt2.03□□□□□ -2.08
IFH1P39520 tH(GUG)G2tH(GUG)G2 72 nt2.03□□□□□ -2.08
IFH1P39520 tH(GUG)HtH(GUG)H 72 nt2.03□□□□□ -2.08
IFH1P39520 tH(GUG)KtH(GUG)K 72 nt2.03□□□□□ -2.08
IFH1P39520 tH(GUG)MtH(GUG)M 72 nt2.03□□□□□ -2.08
IFH1P39520 RDS3YPR094W 324 nt2.02□□□□□ -2.09
IFH1P39520 YER078W-AYER078W-A 165 nt2.01□□□□□ -2.09
IFH1P39520 SSK2YNR031C 4740 nt2□□□□□ -2.09
IFH1P39520 YNL054W-BYNL054W-B 5250 nt1.99□□□□□ -2.09
IFH1P39520 LAA1YJL207C 6045 nt1.98□□□□□ -2.09
IFH1P39520 NIP1YMR309C 2439 nt1.98□□□□□ -2.09
IFH1P39520 RPL41AYDL184C 78 nt1.97□□□□□ -2.09
IFH1P39520 YHR180C-BYHR180C-B 105 nt1.96□□□□□ -2.1
IFH1P39520 YBR296C-AYBR296C-A 120 nt1.96□□□□□ -2.1
IFH1P39520 tQ(UUG)E2tQ(UUG)E2 72 nt1.94□□□□□ -2.1
IFH1P39520 YLL006W-AYLL006W-A 177 nt1.92□□□□□ -2.1
IFH1P39520 snR75snR75 89 nt1.91□□□□□ -2.1
IFH1P39520 PAU12YGR294W 363 nt1.88□□□□□ -2.11
IFH1P39520 CCH1YGR217W 6120 nt1.88□□□□□ -2.11
IFH1P39520 BUL2YML111W 2763 nt1.88□□□□□ -2.11
IFH1P39520 IML1YJR138W 4755 nt1.86□□□□□ -2.11
IFH1P39520 SKI7YOR076C 2244 nt1.86□□□□□ -2.11
IFH1P39520 YJL077W-AYJL077W-A 87 nt1.84□□□□□ -2.11
IFH1P39520 SIP4YJL089W 2490 nt1.84□□□□□ -2.12
IFH1P39520 SPC110YDR356W 2835 nt1.83□□□□□ -2.12
IFH1P39520 SPT7YBR081C 3999 nt1.82□□□□□ -2.12
IFH1P39520 YGR122C-AYGR122C-A 129 nt1.81□□□□□ -2.12
IFH1P39520 MYO1YHR023W 5787 nt1.79□□□□□ -2.12
IFH1P39520 FYV8YGR196C 2454 nt1.77□□□□□ -2.13
IFH1P39520 YNL284C-BYNL284C-B 5268 nt1.77□□□□□ -2.13
IFH1P39520 HKR1YDR420W 5409 nt1.75□□□□□ -2.13
IFH1P39520 tV(UAC)BtV(UAC)B 74 nt1.75□□□□□ -2.13
IFH1P39520 tV(UAC)DtV(UAC)D 74 nt1.75□□□□□ -2.13
IFH1P39520 tQ(UUG)QtQ(UUG)Q 76 nt1.73□□□□□ -2.13
IFH1P39520 RKR1YMR247C 4689 nt1.67□□□□□ -2.14
IFH1P39520 YER090C-AYER090C-A 90 nt1.67□□□□□ -2.14
IFH1P39520 BUD3YCL014W 4911 nt1.67□□□□□ -2.14
IFH1P39520 YPR117WYPR117W 7470 nt1.62□□□□□ -2.15
IFH1P39520 YOR192C-BYOR192C-B 5313 nt1.61□□□□□ -2.15
IFH1P39520 PET111YMR257C 2403 nt1.56□□□□□ -2.16
IFH1P39520 PAU24YBR301W 363 nt1.54□□□□□ -2.16
IFH1P39520 VAM6YDL077C 3150 nt1.52□□□□□ -2.17
IFH1P39520 SCC2YDR180W 4482 nt1.5□□□□□ -2.17
IFH1P39520 BEM2YER155C 6504 nt1.49□□□□□ -2.17
IFH1P39520 snR67snR67 82 nt1.43□□□□□ -2.18
IFH1P39520 LTE1YAL024C 4308 nt1.39□□□□□ -2.19
IFH1P39520 YBL100W-BYBL100W-B 5313 nt1.37□□□□□ -2.19
IFH1P39520 tF(GAA)BtF(GAA)B 73 nt1.36□□□□□ -2.19
IFH1P39520 tF(GAA)FtF(GAA)F 73 nt1.36□□□□□ -2.19
IFH1P39520 tF(GAA)GtF(GAA)G 73 nt1.36□□□□□ -2.19
IFH1P39520 tF(GAA)H1tF(GAA)H1 73 nt1.36□□□□□ -2.19
IFH1P39520 tF(GAA)H2tF(GAA)H2 73 nt1.36□□□□□ -2.19
IFH1P39520 tF(GAA)MtF(GAA)M 73 nt1.36□□□□□ -2.19
IFH1P39520 tF(GAA)P1tF(GAA)P1 73 nt1.36□□□□□ -2.19
IFH1P39520 tF(GAA)P2tF(GAA)P2 73 nt1.36□□□□□ -2.19
IFH1P39520 YMR160WYMR160W 2451 nt1.34□□□□□ -2.19
IFH1P39520 DOP1YDR141C 5097 nt1.28□□□□□ -2.2
IFH1P39520 tV(UAC)QtV(UAC)Q 76 nt1.26□□□□□ -2.21
IFH1P39520 YDL114W-AYDL114W-A 114 nt1.23□□□□□ -2.21
IFH1P39520 YJR029WYJR029W 5268 nt1.23□□□□□ -2.21
IFH1P39520 YPR137C-BYPR137C-B 5268 nt1.23□□□□□ -2.21
IFH1P39520 YKL106C-AYKL106C-A 120 nt1.21□□□□□ -2.22
IFH1P39520 EMT1tM(CAU)D 73 nt1.19□□□□□ -2.22
IFH1P39520 EMT5tM(CAU)J1 73 nt1.19□□□□□ -2.22
IFH1P39520 EMT3tM(CAU)J2 73 nt1.19□□□□□ -2.22
IFH1P39520 EMT4tM(CAU)M 73 nt1.19□□□□□ -2.22
IFH1P39520 EMT2tM(CAU)O2 73 nt1.19□□□□□ -2.22
IFH1P39520 MLP2YIL149C 5040 nt1.16□□□□□ -2.22
IFH1P39520 YOL014WYOL014W 375 nt1.15□□□□□ -2.23
IFH1P39520 YOR376W-AYOR376W-A 156 nt1.11□□□□□ -2.23
IFH1P39520 YPR159C-AYPR159C-A 102 nt1.11□□□□□ -2.23
IFH1P39520 MLP1YKR095W 5628 nt1.1□□□□□ -2.23
IFH1P39520 YKL145W-AYKL145W-A 93 nt1.1□□□□□ -2.23
IFH1P39520 tT(AGU)BtT(AGU)B 73 nt1.09□□□□□ -2.23
IFH1P39520 tT(AGU)CtT(AGU)C 73 nt1.09□□□□□ -2.23
IFH1P39520 tT(AGU)DtT(AGU)D 73 nt1.09□□□□□ -2.23
IFH1P39520 tT(AGU)HtT(AGU)H 73 nt1.09□□□□□ -2.23
IFH1P39520 tT(AGU)I1tT(AGU)I1 73 nt1.09□□□□□ -2.23
IFH1P39520 tT(AGU)I2tT(AGU)I2 73 nt1.09□□□□□ -2.23
IFH1P39520 tT(AGU)JtT(AGU)J 73 nt1.09□□□□□ -2.23
IFH1P39520 tT(AGU)N1tT(AGU)N1 73 nt1.09□□□□□ -2.23
IFH1P39520 tT(AGU)N2tT(AGU)N2 73 nt1.09□□□□□ -2.23
IFH1P39520 tT(AGU)O1tT(AGU)O1 73 nt1.09□□□□□ -2.23
IFH1P39520 tT(AGU)O2tT(AGU)O2 73 nt1.09□□□□□ -2.23
IFH1P39520 UTP20YBL004W 7482 nt1.05□□□□□ -2.24
IFH1P39520 YML100W-AYML100W-A 174 nt1.04□□□□□ -2.24
IFH1P39520 IQG1YPL242C 4488 nt1.03□□□□□ -2.25
IFH1P39520 YOR186C-AYOR186C-A 210 nt0.94□□□□□ -2.26
IFH1P39520 SOV1YMR066W 2697 nt0.92□□□□□ -2.26
IFH1P39520 YOR316C-AYOR316C-A 210 nt0.87□□□□□ -2.27
IFH1P39520 ESP1YGR098C 4893 nt0.86□□□□□ -2.27
IFH1P39520 UTP10YJL109C 5310 nt0.85□□□□□ -2.27
IFH1P39520 snR77snR77 88 nt0.83□□□□□ -2.28
IFH1P39520 snR40snR40 97 nt0.83□□□□□ -2.28
IFH1P39520 FMP27YLR454W 7887 nt0.81□□□□□ -2.28
IFH1P39520 YMR272W-AYMR272W-A 114 nt0.75□□□□□ -2.29
IFH1P39520 THO2YNL139C 4794 nt0.74□□□□□ -2.29
IFH1P39520 SBH2YER019C-A 267 nt0.72□□□□□ -2.29
IFH1P39520 snR128snR128 126 nt0.55□□□□□ -2.32
IFH1P39520 YJL113WYJL113W 4647 nt0.53□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 133 ms