Protein–RNA interactions for Protein: P38871

SSP1, Sporulation-specific protein 1, yeastyeast

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSP1P38871 YGR130CYGR130C 2451 nt2.1□□□□□ -2.07
SSP1P38871 tT(UGU)HtT(UGU)H 72 nt2.09□□□□□ -2.07
SSP1P38871 FKS1YLR342W 5631 nt2.07□□□□□ -2.08
SSP1P38871 FAB1YFR019W 6837 nt2.06□□□□□ -2.08
SSP1P38871 YHR214C-BYHR214C-B 5382 nt2.06□□□□□ -2.08
SSP1P38871 YOR093CYOR093C 4947 nt2.04□□□□□ -2.08
SSP1P38871 PEP1YBL017C 4740 nt2.04□□□□□ -2.08
SSP1P38871 YER090C-AYER090C-A 90 nt2.02□□□□□ -2.09
SSP1P38871 NUP192YJL039C 5052 nt2□□□□□ -2.09
SSP1P38871 MLP2YIL149C 5040 nt2□□□□□ -2.09
SSP1P38871 SPT7YBR081C 3999 nt2□□□□□ -2.09
SSP1P38871 BRR2YER172C 6492 nt1.94□□□□□ -2.1
SSP1P38871 YNL284C-BYNL284C-B 5268 nt1.92□□□□□ -2.1
SSP1P38871 YMR272W-BYMR272W-B 108 nt1.9□□□□□ -2.11
SSP1P38871 VPS15YBR097W 4365 nt1.88□□□□□ -2.11
SSP1P38871 DNF3YMR162C 4971 nt1.88□□□□□ -2.11
SSP1P38871 FIG2YCR089W 4830 nt1.84□□□□□ -2.11
SSP1P38871 PET111YMR257C 2403 nt1.84□□□□□ -2.11
SSP1P38871 snR67snR67 82 nt1.8□□□□□ -2.12
SSP1P38871 SSK2YNR031C 4740 nt1.77□□□□□ -2.13
SSP1P38871 LTE1YAL024C 4308 nt1.77□□□□□ -2.13
SSP1P38871 YNL054W-BYNL054W-B 5250 nt1.76□□□□□ -2.13
SSP1P38871 SPC110YDR356W 2835 nt1.75□□□□□ -2.13
SSP1P38871 VAM6YDL077C 3150 nt1.74□□□□□ -2.13
SSP1P38871 YPR117WYPR117W 7470 nt1.7□□□□□ -2.14
SSP1P38871 YOR192C-BYOR192C-B 5313 nt1.69□□□□□ -2.14
SSP1P38871 IRA1YBR140C 9279 nt1.68□□□□□ -2.14
SSP1P38871 SCC2YDR180W 4482 nt1.68□□□□□ -2.14
SSP1P38871 MEC1YBR136W 7107 nt1.68□□□□□ -2.14
SSP1P38871 RKR1YMR247C 4689 nt1.64□□□□□ -2.15
SSP1P38871 HKR1YDR420W 5409 nt1.58□□□□□ -2.16
SSP1P38871 CCH1YGR217W 6120 nt1.55□□□□□ -2.16
SSP1P38871 YDL114W-AYDL114W-A 114 nt1.55□□□□□ -2.16
SSP1P38871 YKL106C-AYKL106C-A 120 nt1.54□□□□□ -2.16
SSP1P38871 tQ(UUG)E2tQ(UUG)E2 72 nt1.53□□□□□ -2.16
SSP1P38871 YMR160WYMR160W 2451 nt1.49□□□□□ -2.17
SSP1P38871 YBL100W-BYBL100W-B 5313 nt1.48□□□□□ -2.17
SSP1P38871 PAU24YBR301W 363 nt1.48□□□□□ -2.17
SSP1P38871 MLP1YKR095W 5628 nt1.47□□□□□ -2.17
SSP1P38871 BUD3YCL014W 4911 nt1.43□□□□□ -2.18
SSP1P38871 DOP1YDR141C 5097 nt1.42□□□□□ -2.18
SSP1P38871 BEM2YER155C 6504 nt1.42□□□□□ -2.18
SSP1P38871 tV(UAC)QtV(UAC)Q 76 nt1.42□□□□□ -2.18
SSP1P38871 tH(GUG)E1tH(GUG)E1 72 nt1.4□□□□□ -2.19
SSP1P38871 tH(GUG)E2tH(GUG)E2 72 nt1.4□□□□□ -2.19
SSP1P38871 tH(GUG)G1tH(GUG)G1 72 nt1.4□□□□□ -2.19
SSP1P38871 tH(GUG)G2tH(GUG)G2 72 nt1.4□□□□□ -2.19
SSP1P38871 tH(GUG)HtH(GUG)H 72 nt1.4□□□□□ -2.19
SSP1P38871 tH(GUG)KtH(GUG)K 72 nt1.4□□□□□ -2.19
SSP1P38871 tH(GUG)MtH(GUG)M 72 nt1.4□□□□□ -2.19
SSP1P38871 IQG1YPL242C 4488 nt1.38□□□□□ -2.19
SSP1P38871 YJR029WYJR029W 5268 nt1.36□□□□□ -2.19
SSP1P38871 YPR137C-BYPR137C-B 5268 nt1.35□□□□□ -2.19
SSP1P38871 IML1YJR138W 4755 nt1.35□□□□□ -2.19
SSP1P38871 YOR376W-AYOR376W-A 156 nt1.34□□□□□ -2.19
SSP1P38871 tV(UAC)BtV(UAC)B 74 nt1.29□□□□□ -2.2
SSP1P38871 tV(UAC)DtV(UAC)D 74 nt1.29□□□□□ -2.2
SSP1P38871 YOR186C-AYOR186C-A 210 nt1.24□□□□□ -2.21
SSP1P38871 YML100W-AYML100W-A 174 nt1.19□□□□□ -2.22
SSP1P38871 EMT1tM(CAU)D 73 nt1.15□□□□□ -2.23
SSP1P38871 EMT5tM(CAU)J1 73 nt1.15□□□□□ -2.23
SSP1P38871 EMT3tM(CAU)J2 73 nt1.15□□□□□ -2.23
SSP1P38871 EMT4tM(CAU)M 73 nt1.15□□□□□ -2.23
SSP1P38871 EMT2tM(CAU)O2 73 nt1.15□□□□□ -2.23
SSP1P38871 MYO1YHR023W 5787 nt1.13□□□□□ -2.23
SSP1P38871 YOR316C-AYOR316C-A 210 nt1.1□□□□□ -2.23
SSP1P38871 snR40snR40 97 nt1.05□□□□□ -2.24
SSP1P38871 UTP20YBL004W 7482 nt1.03□□□□□ -2.24
SSP1P38871 ESP1YGR098C 4893 nt1.01□□□□□ -2.25
SSP1P38871 snR77snR77 88 nt1.01□□□□□ -2.25
SSP1P38871 YPR159C-AYPR159C-A 102 nt0.99□□□□□ -2.25
SSP1P38871 SBH2YER019C-A 267 nt0.97□□□□□ -2.25
SSP1P38871 SOV1YMR066W 2697 nt0.88□□□□□ -2.27
SSP1P38871 tF(GAA)BtF(GAA)B 73 nt0.79□□□□□ -2.28
SSP1P38871 tF(GAA)FtF(GAA)F 73 nt0.79□□□□□ -2.28
SSP1P38871 tF(GAA)GtF(GAA)G 73 nt0.79□□□□□ -2.28
SSP1P38871 tF(GAA)H1tF(GAA)H1 73 nt0.79□□□□□ -2.28
SSP1P38871 tF(GAA)H2tF(GAA)H2 73 nt0.79□□□□□ -2.28
SSP1P38871 tF(GAA)MtF(GAA)M 73 nt0.79□□□□□ -2.28
SSP1P38871 tF(GAA)P1tF(GAA)P1 73 nt0.79□□□□□ -2.28
SSP1P38871 tF(GAA)P2tF(GAA)P2 73 nt0.79□□□□□ -2.28
SSP1P38871 UTP10YJL109C 5310 nt0.79□□□□□ -2.28
SSP1P38871 tT(AGU)BtT(AGU)B 73 nt0.74□□□□□ -2.29
SSP1P38871 tT(AGU)CtT(AGU)C 73 nt0.74□□□□□ -2.29
SSP1P38871 tT(AGU)DtT(AGU)D 73 nt0.74□□□□□ -2.29
SSP1P38871 tT(AGU)HtT(AGU)H 73 nt0.74□□□□□ -2.29
SSP1P38871 tT(AGU)I1tT(AGU)I1 73 nt0.74□□□□□ -2.29
SSP1P38871 tT(AGU)I2tT(AGU)I2 73 nt0.74□□□□□ -2.29
SSP1P38871 tT(AGU)JtT(AGU)J 73 nt0.74□□□□□ -2.29
SSP1P38871 tT(AGU)N1tT(AGU)N1 73 nt0.74□□□□□ -2.29
SSP1P38871 tT(AGU)N2tT(AGU)N2 73 nt0.74□□□□□ -2.29
SSP1P38871 tT(AGU)O1tT(AGU)O1 73 nt0.74□□□□□ -2.29
SSP1P38871 tT(AGU)O2tT(AGU)O2 73 nt0.74□□□□□ -2.29
SSP1P38871 THO2YNL139C 4794 nt0.73□□□□□ -2.29
SSP1P38871 PAU9YBL108C-A 129 nt0.71□□□□□ -2.3
SSP1P38871 YJL113WYJL113W 4647 nt0.71□□□□□ -2.3
SSP1P38871 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
SSP1P38871 snR128snR128 126 nt0.7□□□□□ -2.3
SSP1P38871 FMP27YLR454W 7887 nt0.69□□□□□ -2.3
SSP1P38871 YKL145W-AYKL145W-A 93 nt0.62□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 38.9 ms