Protein–RNA interactions for Protein: P38852

LIN1, Protein LIN1, yeastyeast

Predicted RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LIN1P38852 YOR170WYOR170W 306 nt-0.55□□□□□ -2.5
LIN1P38852 tQ(UUG)QtQ(UUG)Q 76 nt-0.59□□□□□ -2.5
LIN1P38852 YGL188C-AYGL188C-A 141 nt-0.6□□□□□ -2.51
LIN1P38852 YML100W-AYML100W-A 174 nt-0.6□□□□□ -2.51
LIN1P38852 YJL113WYJL113W 4647 nt-0.61□□□□□ -2.51
LIN1P38852 YNL097C-BYNL097C-B 123 nt-0.62□□□□□ -2.51
LIN1P38852 snR39BsnR39B 96 nt-0.62□□□□□ -2.51
LIN1P38852 YOR302WYOR302W 78 nt-0.64□□□□□ -2.51
LIN1P38852 YDL007C-AYDL007C-A 258 nt-0.65□□□□□ -2.51
LIN1P38852 snR69snR69 101 nt-0.65□□□□□ -2.51
LIN1P38852 YGR146C-AYGR146C-A 162 nt-0.65□□□□□ -2.51
LIN1P38852 YOR231C-AYOR231C-A 201 nt-0.65□□□□□ -2.51
LIN1P38852 URB1YKL014C 5295 nt-0.67□□□□□ -2.52
LIN1P38852 PAU9YBL108C-A 129 nt-0.68□□□□□ -2.52
LIN1P38852 YOR329W-AYOR329W-A 210 nt-0.71□□□□□ -2.52
LIN1P38852 tA(UGC)QtA(UGC)Q 76 nt-0.73□□□□□ -2.53
LIN1P38852 YNL067W-BYNL067W-B 141 nt-0.73□□□□□ -2.53
LIN1P38852 YHL009W-BYHL009W-B 5409 nt-0.73□□□□□ -2.53
LIN1P38852 PMP2YEL017C-A 132 nt-0.74□□□□□ -2.53
LIN1P38852 RDS3YPR094W 324 nt-0.74□□□□□ -2.53
LIN1P38852 YLR342W-AYLR342W-A 174 nt-0.76□□□□□ -2.53
LIN1P38852 snR52snR52 92 nt-0.77□□□□□ -2.53
LIN1P38852 YER090C-AYER090C-A 90 nt-0.79□□□□□ -2.54
LIN1P38852 tT(UGU)G1tT(UGU)G1 72 nt-0.83□□□□□ -2.54
LIN1P38852 tT(UGU)G2tT(UGU)G2 72 nt-0.83□□□□□ -2.54
LIN1P38852 tT(UGU)PtT(UGU)P 72 nt-0.83□□□□□ -2.54
LIN1P38852 snR48snR48 113 nt-0.83□□□□□ -2.54
LIN1P38852 snR80snR80 171 nt-0.85□□□□□ -2.55
LIN1P38852 snR50snR50 90 nt-0.85□□□□□ -2.55
LIN1P38852 YNL266WYNL266W 420 nt-0.87□□□□□ -2.55
LIN1P38852 YNL205CYNL205C 423 nt-0.88□□□□□ -2.55
LIN1P38852 tD(GUC)QtD(GUC)Q 75 nt-0.89□□□□□ -2.55
LIN1P38852 YHL015W-AYHL015W-A 84 nt-0.92□□□□□ -2.56
LIN1P38852 YOR102WYOR102W 351 nt-0.92□□□□□ -2.56
LIN1P38852 snR33snR33 183 nt-0.93□□□□□ -2.56
LIN1P38852 tL(UAA)QtL(UAA)Q 85 nt-0.96□□□□□ -2.56
LIN1P38852 YLR286W-AYLR286W-A 135 nt-0.96□□□□□ -2.56
LIN1P38852 JLP2YMR132C 627 nt-0.96□□□□□ -2.56
LIN1P38852 YDR406W-AYDR406W-A 246 nt-0.97□□□□□ -2.56
LIN1P38852 YBR178WYBR178W 375 nt-0.98□□□□□ -2.57
LIN1P38852 snR161snR161 161 nt-0.99□□□□□ -2.57
LIN1P38852 snR67snR67 82 nt-1□□□□□ -2.57
LIN1P38852 YDL159C-BYDL159C-B 177 nt-1.02□□□□□ -2.57
LIN1P38852 Q0142Q0142 177 nt-1.04□□□□□ -2.58
LIN1P38852 YBR223W-AYBR223W-A 120 nt-1.15□□□□□ -2.59
LIN1P38852 YBR196C-AYBR196C-A 150 nt-1.17□□□□□ -2.6
LIN1P38852 YLR299C-AYLR299C-A 93 nt-1.18□□□□□ -2.6
LIN1P38852 SKI7YOR076C 2244 nt-1.2□□□□□ -2.6
LIN1P38852 YNL198CYNL198C 303 nt-1.21□□□□□ -2.6
LIN1P38852 YMR046W-AYMR046W-A 129 nt-1.24□□□□□ -2.61
LIN1P38852 YJL150WYJL150W 303 nt-1.26□□□□□ -2.61
LIN1P38852 SOM1YEL059C-A 225 nt-1.33□□□□□ -2.62
LIN1P38852 tP(UGG)QtP(UGG)Q 72 nt-1.35□□□□□ -2.63
LIN1P38852 YBL053WYBL053W 375 nt-1.38□□□□□ -2.63
LIN1P38852 SPG3YDR504C 384 nt-1.39□□□□□ -2.63
LIN1P38852 YCR095W-AYCR095W-A 159 nt-1.4□□□□□ -2.63
LIN1P38852 YML054C-AYML054C-A 159 nt-1.4□□□□□ -2.63
LIN1P38852 tM(CAU)Q1tM(CAU)Q1 76 nt-1.46□□□□□ -2.64
LIN1P38852 YHR180C-BYHR180C-B 105 nt-1.46□□□□□ -2.64
LIN1P38852 YNR077CYNR077C 255 nt-1.47□□□□□ -2.64
LIN1P38852 YGR240C-AYGR240C-A 201 nt-1.66□□□□□ -2.68
LIN1P38852 CDC65tQ(CUG)M 72 nt-1.67□□□□□ -2.68
LIN1P38852 YLR466C-BYLR466C-B 117 nt-1.67□□□□□ -2.68
LIN1P38852 YGR151CYGR151C 336 nt-1.69□□□□□ -2.68
LIN1P38852 YOR376W-AYOR376W-A 156 nt-1.7□□□□□ -2.68
LIN1P38852 snR77snR77 88 nt-1.71□□□□□ -2.68
LIN1P38852 tY(GUA)QtY(GUA)Q 84 nt-1.77□□□□□ -2.69
LIN1P38852 YKL106C-AYKL106C-A 120 nt-1.78□□□□□ -2.69
LIN1P38852 YCL001W-BYCL001W-B 255 nt-1.79□□□□□ -2.7
LIN1P38852 RPL41AYDL184C 78 nt-1.8□□□□□ -2.7
LIN1P38852 YOL083C-AYOL083C-A 141 nt-1.8□□□□□ -2.7
LIN1P38852 YNL338WYNL338W 159 nt-1.81□□□□□ -2.7
LIN1P38852 YBR296C-AYBR296C-A 120 nt-1.81□□□□□ -2.7
LIN1P38852 YOR316C-AYOR316C-A 210 nt-1.85□□□□□ -2.71
LIN1P38852 YBR109W-AYBR109W-A 225 nt-1.87□□□□□ -2.71
LIN1P38852 YBL071C-BYBL071C-B 99 nt-1.89□□□□□ -2.71
LIN1P38852 YMR315W-AYMR315W-A 108 nt-1.92□□□□□ -2.72
LIN1P38852 YOL164W-AYOL164W-A 183 nt-1.93□□□□□ -2.72
LIN1P38852 YAL037C-AYAL037C-A 93 nt-1.94□□□□□ -2.72
LIN1P38852 snR81snR81 201 nt-1.96□□□□□ -2.72
LIN1P38852 YBL100W-CYBL100W-C 120 nt-1.99□□□□□ -2.73
LIN1P38852 YNL337WYNL337W 255 nt-2.02□□□□□ -2.73
LIN1P38852 snR38snR38 95 nt-2.03□□□□□ -2.73
LIN1P38852 snR47snR47 99 nt-2.05□□□□□ -2.74
LIN1P38852 Q0032Q0032 291 nt-2.11□□□□□ -2.75
LIN1P38852 YBR126W-BYBR126W-B 144 nt-2.2□□□□□ -2.76
LIN1P38852 YGL007C-AYGL007C-A 87 nt-2.27□□□□□ -2.77
LIN1P38852 YOR309CYOR309C 381 nt-2.33□□□□□ -2.78
LIN1P38852 YKL225WYKL225W 348 nt-2.37□□□□□ -2.79
LIN1P38852 tS(GCU)Q1tS(GCU)Q1 86 nt-2.38□□□□□ -2.79
LIN1P38852 YGL041C-BYGL041C-B 183 nt-2.4□□□□□ -2.79
LIN1P38852 snR61snR61 90 nt-2.46□□□□□ -2.8
LIN1P38852 YNL103W-AYNL103W-A 90 nt-2.48□□□□□ -2.81
LIN1P38852 snR6snR6 112 nt-2.49□□□□□ -2.81
LIN1P38852 YDR034C-AYDR034C-A 177 nt-2.57□□□□□ -2.82
LIN1P38852 YDL114W-AYDL114W-A 114 nt-2.58□□□□□ -2.82
LIN1P38852 RPL41BYDL133C-A 78 nt-2.6□□□□□ -2.83
LIN1P38852 tV(UAC)QtV(UAC)Q 76 nt-2.64□□□□□ -2.83
LIN1P38852 YLR294CYLR294C 330 nt-2.64□□□□□ -2.83
LIN1P38852 YDR543CYDR543C 300 nt-2.65□□□□□ -2.83
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms