Protein–RNA interactions for Protein: P38764

RPN1, 26S proteasome regulatory subunit RPN1, yeastyeast

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN1P38764 EST1YLR233C 2100 nt1.46□□□□□ -2.18
RPN1P38764 SIP4YJL089W 2490 nt1.45□□□□□ -2.18
RPN1P38764 snR62snR62 100 nt1.45□□□□□ -2.18
RPN1P38764 YLR286W-AYLR286W-A 135 nt1.45□□□□□ -2.18
RPN1P38764 NIP1YMR309C 2439 nt1.45□□□□□ -2.18
RPN1P38764 YLL066W-BYLL066W-B 171 nt1.42□□□□□ -2.18
RPN1P38764 YJL077W-AYJL077W-A 87 nt1.41□□□□□ -2.18
RPN1P38764 RDS3YPR094W 324 nt1.37□□□□□ -2.19
RPN1P38764 snR45snR45 172 nt1.37□□□□□ -2.19
RPN1P38764 YBL100W-CYBL100W-C 120 nt1.36□□□□□ -2.19
RPN1P38764 DOP1YDR141C 5097 nt1.34□□□□□ -2.19
RPN1P38764 YOL164W-AYOL164W-A 183 nt1.33□□□□□ -2.2
RPN1P38764 YOR192C-BYOR192C-B 5313 nt1.33□□□□□ -2.2
RPN1P38764 VAM6YDL077C 3150 nt1.31□□□□□ -2.2
RPN1P38764 tF(GAA)BtF(GAA)B 73 nt1.31□□□□□ -2.2
RPN1P38764 tF(GAA)FtF(GAA)F 73 nt1.31□□□□□ -2.2
RPN1P38764 tF(GAA)GtF(GAA)G 73 nt1.31□□□□□ -2.2
RPN1P38764 tF(GAA)H1tF(GAA)H1 73 nt1.31□□□□□ -2.2
RPN1P38764 tF(GAA)H2tF(GAA)H2 73 nt1.31□□□□□ -2.2
RPN1P38764 tF(GAA)MtF(GAA)M 73 nt1.31□□□□□ -2.2
RPN1P38764 tF(GAA)P1tF(GAA)P1 73 nt1.31□□□□□ -2.2
RPN1P38764 tF(GAA)P2tF(GAA)P2 73 nt1.31□□□□□ -2.2
RPN1P38764 PET111YMR257C 2403 nt1.3□□□□□ -2.2
RPN1P38764 YLR299C-AYLR299C-A 93 nt1.3□□□□□ -2.2
RPN1P38764 YDL159C-BYDL159C-B 177 nt1.29□□□□□ -2.2
RPN1P38764 YDR371C-AYDR371C-A 105 nt1.27□□□□□ -2.21
RPN1P38764 EMT1tM(CAU)D 73 nt1.27□□□□□ -2.21
RPN1P38764 EMT5tM(CAU)J1 73 nt1.27□□□□□ -2.21
RPN1P38764 EMT3tM(CAU)J2 73 nt1.27□□□□□ -2.21
RPN1P38764 EMT4tM(CAU)M 73 nt1.27□□□□□ -2.21
RPN1P38764 EMT2tM(CAU)O2 73 nt1.27□□□□□ -2.21
RPN1P38764 YGR240C-AYGR240C-A 201 nt1.25□□□□□ -2.21
RPN1P38764 YJR029WYJR029W 5268 nt1.25□□□□□ -2.21
RPN1P38764 YPR137C-BYPR137C-B 5268 nt1.25□□□□□ -2.21
RPN1P38764 BEM2YER155C 6504 nt1.25□□□□□ -2.21
RPN1P38764 BUD3YCL014W 4911 nt1.23□□□□□ -2.21
RPN1P38764 MLP1YKR095W 5628 nt1.19□□□□□ -2.22
RPN1P38764 YDR034C-AYDR034C-A 177 nt1.18□□□□□ -2.22
RPN1P38764 tQ(UUG)QtQ(UUG)Q 76 nt1.15□□□□□ -2.23
RPN1P38764 IQG1YPL242C 4488 nt1.13□□□□□ -2.23
RPN1P38764 ORC3YLL004W 1851 nt1.12□□□□□ -2.23
RPN1P38764 snR47snR47 99 nt1.12□□□□□ -2.23
RPN1P38764 YOL014WYOL014W 375 nt1.11□□□□□ -2.23
RPN1P38764 YBL100W-BYBL100W-B 5313 nt1.09□□□□□ -2.23
RPN1P38764 UTP20YBL004W 7482 nt1.08□□□□□ -2.24
RPN1P38764 YNL054W-BYNL054W-B 5250 nt1.07□□□□□ -2.24
RPN1P38764 YER090C-AYER090C-A 90 nt1.03□□□□□ -2.24
RPN1P38764 YML054C-AYML054C-A 159 nt1.02□□□□□ -2.25
RPN1P38764 YMR160WYMR160W 2451 nt1.01□□□□□ -2.25
RPN1P38764 YKL145W-AYKL145W-A 93 nt1.01□□□□□ -2.25
RPN1P38764 YHR180C-BYHR180C-B 105 nt1□□□□□ -2.25
RPN1P38764 YPR159C-AYPR159C-A 102 nt1□□□□□ -2.25
RPN1P38764 snR50snR50 90 nt0.93□□□□□ -2.26
RPN1P38764 MYO1YHR023W 5787 nt0.93□□□□□ -2.26
RPN1P38764 YOR186C-AYOR186C-A 210 nt0.91□□□□□ -2.26
RPN1P38764 tT(AGU)BtT(AGU)B 73 nt0.87□□□□□ -2.27
RPN1P38764 tT(AGU)CtT(AGU)C 73 nt0.87□□□□□ -2.27
RPN1P38764 tT(AGU)DtT(AGU)D 73 nt0.87□□□□□ -2.27
RPN1P38764 tT(AGU)HtT(AGU)H 73 nt0.87□□□□□ -2.27
RPN1P38764 tT(AGU)I1tT(AGU)I1 73 nt0.87□□□□□ -2.27
RPN1P38764 tT(AGU)I2tT(AGU)I2 73 nt0.87□□□□□ -2.27
RPN1P38764 tT(AGU)JtT(AGU)J 73 nt0.87□□□□□ -2.27
RPN1P38764 tT(AGU)N1tT(AGU)N1 73 nt0.87□□□□□ -2.27
RPN1P38764 tT(AGU)N2tT(AGU)N2 73 nt0.87□□□□□ -2.27
RPN1P38764 tT(AGU)O1tT(AGU)O1 73 nt0.87□□□□□ -2.27
RPN1P38764 tT(AGU)O2tT(AGU)O2 73 nt0.87□□□□□ -2.27
RPN1P38764 YBR109W-AYBR109W-A 225 nt0.87□□□□□ -2.27
RPN1P38764 AI1Q0050 2505 nt0.85□□□□□ -2.27
RPN1P38764 RPL41AYDL184C 78 nt0.84□□□□□ -2.27
RPN1P38764 YBR296C-AYBR296C-A 120 nt0.84□□□□□ -2.27
RPN1P38764 MLP2YIL149C 5040 nt0.82□□□□□ -2.28
RPN1P38764 UTP10YJL109C 5310 nt0.81□□□□□ -2.28
RPN1P38764 YMR272W-AYMR272W-A 114 nt0.8□□□□□ -2.28
RPN1P38764 snR67snR67 82 nt0.77□□□□□ -2.29
RPN1P38764 snR64snR64 101 nt0.76□□□□□ -2.29
RPN1P38764 YKL225WYKL225W 348 nt0.76□□□□□ -2.29
RPN1P38764 snR38snR38 95 nt0.7□□□□□ -2.3
RPN1P38764 snR53snR53 91 nt0.68□□□□□ -2.3
RPN1P38764 FMP27YLR454W 7887 nt0.67□□□□□ -2.3
RPN1P38764 SOV1YMR066W 2697 nt0.62□□□□□ -2.31
RPN1P38764 ESP1YGR098C 4893 nt0.57□□□□□ -2.32
RPN1P38764 YML100W-AYML100W-A 174 nt0.56□□□□□ -2.32
RPN1P38764 YER078W-AYER078W-A 165 nt0.51□□□□□ -2.33
RPN1P38764 YOL013W-AYOL013W-A 192 nt0.51□□□□□ -2.33
RPN1P38764 SKI7YOR076C 2244 nt0.4□□□□□ -2.35
RPN1P38764 snR128snR128 126 nt0.39□□□□□ -2.35
RPN1P38764 THO2YNL139C 4794 nt0.39□□□□□ -2.35
RPN1P38764 YDL159W-AYDL159W-A 132 nt0.25□□□□□ -2.37
RPN1P38764 YKL106C-AYKL106C-A 120 nt0.22□□□□□ -2.37
RPN1P38764 YGR122C-AYGR122C-A 129 nt0.19□□□□□ -2.38
RPN1P38764 PAU9YBL108C-A 129 nt0.11□□□□□ -2.39
RPN1P38764 YLR149C-AYLR149C-A 87 nt0.05□□□□□ -2.4
RPN1P38764 YOR376W-AYOR376W-A 156 nt-0.01□□□□□ -2.41
RPN1P38764 tA(UGC)QtA(UGC)Q 76 nt-0.03□□□□□ -2.41
RPN1P38764 YOR316C-AYOR316C-A 210 nt-0.1□□□□□ -2.43
RPN1P38764 YDL114W-AYDL114W-A 114 nt-0.15□□□□□ -2.43
RPN1P38764 SBH2YER019C-A 267 nt-0.18□□□□□ -2.44
RPN1P38764 YKL096C-BYKL096C-B 150 nt-0.19□□□□□ -2.44
RPN1P38764 tV(UAC)QtV(UAC)Q 76 nt-0.23□□□□□ -2.45
RPN1P38764 YJL113WYJL113W 4647 nt-0.27□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 63.1 ms