Protein–RNA interactions for Protein: P38351

PAF1, RNA polymerase II-associated protein 1, yeastyeast

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PAF1P38351 YOR102WYOR102W 351 nt0.47□□□□□ -2.33
PAF1P38351 RCO1YMR075W 2055 nt0.46□□□□□ -2.34
PAF1P38351 snR39BsnR39B 96 nt0.43□□□□□ -2.34
PAF1P38351 YOR186C-AYOR186C-A 210 nt0.42□□□□□ -2.34
PAF1P38351 RPM2YML091C 3609 nt0.42□□□□□ -2.34
PAF1P38351 THO2YNL139C 4794 nt0.4□□□□□ -2.35
PAF1P38351 YER078W-AYER078W-A 165 nt0.39□□□□□ -2.35
PAF1P38351 tL(UAA)QtL(UAA)Q 85 nt0.38□□□□□ -2.35
PAF1P38351 YDL007C-AYDL007C-A 258 nt0.37□□□□□ -2.35
PAF1P38351 YBL100W-BYBL100W-B 5313 nt0.37□□□□□ -2.35
PAF1P38351 YGR146C-AYGR146C-A 162 nt0.35□□□□□ -2.35
PAF1P38351 YBR099CYBR099C 384 nt0.35□□□□□ -2.35
PAF1P38351 YNL338WYNL338W 159 nt0.34□□□□□ -2.36
PAF1P38351 Q0032Q0032 291 nt0.33□□□□□ -2.36
PAF1P38351 YNL067W-BYNL067W-B 141 nt0.33□□□□□ -2.36
PAF1P38351 MLP2YIL149C 5040 nt0.32□□□□□ -2.36
PAF1P38351 YBL053WYBL053W 375 nt0.3□□□□□ -2.36
PAF1P38351 YOL013W-AYOL013W-A 192 nt0.3□□□□□ -2.36
PAF1P38351 YNL054W-BYNL054W-B 5250 nt0.29□□□□□ -2.36
PAF1P38351 YGL007C-AYGL007C-A 87 nt0.26□□□□□ -2.37
PAF1P38351 EST1YLR233C 2100 nt0.25□□□□□ -2.37
PAF1P38351 YJL077W-AYJL077W-A 87 nt0.2□□□□□ -2.38
PAF1P38351 YNL205CYNL205C 423 nt0.18□□□□□ -2.38
PAF1P38351 ESP1YGR098C 4893 nt0.17□□□□□ -2.38
PAF1P38351 snR69snR69 101 nt0.14□□□□□ -2.39
PAF1P38351 PMP2YEL017C-A 132 nt0.14□□□□□ -2.39
PAF1P38351 tQ(UUG)QtQ(UUG)Q 76 nt0.11□□□□□ -2.39
PAF1P38351 SOV1YMR066W 2697 nt0.1□□□□□ -2.39
PAF1P38351 snR128snR128 126 nt0.09□□□□□ -2.4
PAF1P38351 YOR225WYOR225W 330 nt0.08□□□□□ -2.4
PAF1P38351 SOM1YEL059C-A 225 nt0.06□□□□□ -2.4
PAF1P38351 RDS3YPR094W 324 nt0.05□□□□□ -2.4
PAF1P38351 snR45snR45 172 nt0.05□□□□□ -2.4
PAF1P38351 YGR164WYGR164W 336 nt0.04□□□□□ -2.4
PAF1P38351 SEC10YLR166C 2616 nt0.04□□□□□ -2.4
PAF1P38351 YCR095W-AYCR095W-A 159 nt0.02□□□□□ -2.41
PAF1P38351 tD(GUC)QtD(GUC)Q 75 nt0□□□□□ -2.41
PAF1P38351 YLR294CYLR294C 330 nt0□□□□□ -2.41
PAF1P38351 YPL060C-AYPL060C-A 3315 nt0□□□□□ -2.41
PAF1P38351 YNL266WYNL266W 420 nt-0.03□□□□□ -2.41
PAF1P38351 YBR178WYBR178W 375 nt-0.04□□□□□ -2.42
PAF1P38351 YCL001W-BYCL001W-B 255 nt-0.1□□□□□ -2.43
PAF1P38351 YBR196C-AYBR196C-A 150 nt-0.11□□□□□ -2.43
PAF1P38351 YER090C-AYER090C-A 90 nt-0.12□□□□□ -2.43
PAF1P38351 YLR286W-AYLR286W-A 135 nt-0.12□□□□□ -2.43
PAF1P38351 YDL159C-BYDL159C-B 177 nt-0.15□□□□□ -2.43
PAF1P38351 YIL071W-AYIL071W-A 477 nt-0.15□□□□□ -2.43
PAF1P38351 snR50snR50 90 nt-0.17□□□□□ -2.44
PAF1P38351 YML100W-AYML100W-A 174 nt-0.22□□□□□ -2.44
PAF1P38351 YLR299C-AYLR299C-A 93 nt-0.25□□□□□ -2.45
PAF1P38351 SBH2YER019C-A 267 nt-0.27□□□□□ -2.45
PAF1P38351 TFB5YDR079C-A 219 nt-0.31□□□□□ -2.46
PAF1P38351 snR67snR67 82 nt-0.35□□□□□ -2.47
PAF1P38351 PAU9YBL108C-A 129 nt-0.35□□□□□ -2.47
PAF1P38351 YNL170WYNL170W 396 nt-0.36□□□□□ -2.47
PAF1P38351 ATP8Q0080 147 nt-0.46□□□□□ -2.48
PAF1P38351 tA(UGC)QtA(UGC)Q 76 nt-0.49□□□□□ -2.49
PAF1P38351 YJL113WYJL113W 4647 nt-0.51□□□□□ -2.49
PAF1P38351 YML054C-AYML054C-A 159 nt-0.52□□□□□ -2.49
PAF1P38351 YHR180C-BYHR180C-B 105 nt-0.53□□□□□ -2.49
PAF1P38351 YOL083C-AYOL083C-A 141 nt-0.53□□□□□ -2.49
PAF1P38351 YAL037C-AYAL037C-A 93 nt-0.6□□□□□ -2.51
PAF1P38351 Q0092Q0092 141 nt-0.64□□□□□ -2.51
PAF1P38351 YBL071C-BYBL071C-B 99 nt-0.64□□□□□ -2.51
PAF1P38351 SKI7YOR076C 2244 nt-0.64□□□□□ -2.51
PAF1P38351 URB1YKL014C 5295 nt-0.64□□□□□ -2.51
PAF1P38351 snR81snR81 201 nt-0.69□□□□□ -2.52
PAF1P38351 YNL103W-AYNL103W-A 90 nt-0.69□□□□□ -2.52
PAF1P38351 YOL164W-AYOL164W-A 183 nt-0.72□□□□□ -2.52
PAF1P38351 snR61snR61 90 nt-0.74□□□□□ -2.53
PAF1P38351 YBL100W-CYBL100W-C 120 nt-0.74□□□□□ -2.53
PAF1P38351 YGL041C-BYGL041C-B 183 nt-0.76□□□□□ -2.53
PAF1P38351 RPL41AYDL184C 78 nt-0.81□□□□□ -2.54
PAF1P38351 YBR296C-AYBR296C-A 120 nt-0.84□□□□□ -2.54
PAF1P38351 tT(UGU)G1tT(UGU)G1 72 nt-0.85□□□□□ -2.55
PAF1P38351 tT(UGU)G2tT(UGU)G2 72 nt-0.85□□□□□ -2.55
PAF1P38351 tT(UGU)PtT(UGU)P 72 nt-0.85□□□□□ -2.55
PAF1P38351 snR47snR47 99 nt-0.85□□□□□ -2.55
PAF1P38351 YBR109W-AYBR109W-A 225 nt-0.86□□□□□ -2.55
PAF1P38351 YGR240C-AYGR240C-A 201 nt-0.87□□□□□ -2.55
PAF1P38351 snR161snR161 161 nt-0.88□□□□□ -2.55
PAF1P38351 snR33snR33 183 nt-0.88□□□□□ -2.55
PAF1P38351 Q0143Q0143 153 nt-0.98□□□□□ -2.57
PAF1P38351 YHL009W-BYHL009W-B 5409 nt-0.98□□□□□ -2.57
PAF1P38351 YKL106C-AYKL106C-A 120 nt-1.05□□□□□ -2.58
PAF1P38351 snR38snR38 95 nt-1.05□□□□□ -2.58
PAF1P38351 YOR376W-AYOR376W-A 156 nt-1.09□□□□□ -2.58
PAF1P38351 tS(GCU)Q1tS(GCU)Q1 86 nt-1.11□□□□□ -2.59
PAF1P38351 snR62snR62 100 nt-1.17□□□□□ -2.6
PAF1P38351 YDR034C-AYDR034C-A 177 nt-1.17□□□□□ -2.6
PAF1P38351 YBR223W-AYBR223W-A 120 nt-1.19□□□□□ -2.6
PAF1P38351 YKL225WYKL225W 348 nt-1.21□□□□□ -2.6
PAF1P38351 YMR326CYMR326C 309 nt-1.21□□□□□ -2.6
PAF1P38351 snR85snR85 171 nt-1.25□□□□□ -2.61
PAF1P38351 YOR316C-AYOR316C-A 210 nt-1.25□□□□□ -2.61
PAF1P38351 YHR217CYHR217C 462 nt-1.32□□□□□ -2.62
PAF1P38351 tP(UGG)QtP(UGG)Q 72 nt-1.35□□□□□ -2.63
PAF1P38351 snR77snR77 88 nt-1.48□□□□□ -2.65
PAF1P38351 CDC65tQ(CUG)M 72 nt-1.5□□□□□ -2.65
PAF1P38351 YBL109WYBL109W 336 nt-1.51□□□□□ -2.65
Retrieved 100 of 7,029 protein–RNA pairs in 25.8 ms