Protein–RNA interactions for Protein: P38301

GDT1, GCR1-dependent translation factor 1, yeastyeast

Predicted RBP Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GDT1P38301 TFB5YDR079C-A 219 nt-0.47□□□□□ -2.48
GDT1P38301 tM(CAU)Q2tM(CAU)Q2 78 nt-0.52□□□□□ -2.49
GDT1P38301 snR39BsnR39B 96 nt-0.52□□□□□ -2.49
GDT1P38301 YML100W-AYML100W-A 174 nt-0.53□□□□□ -2.49
GDT1P38301 YJL077W-AYJL077W-A 87 nt-0.54□□□□□ -2.5
GDT1P38301 YOR329W-AYOR329W-A 210 nt-0.54□□□□□ -2.5
GDT1P38301 snR46snR46 197 nt-0.55□□□□□ -2.5
GDT1P38301 snR69snR69 101 nt-0.56□□□□□ -2.5
GDT1P38301 YDL007C-AYDL007C-A 258 nt-0.59□□□□□ -2.5
GDT1P38301 YGR146C-AYGR146C-A 162 nt-0.59□□□□□ -2.5
GDT1P38301 SEC10YLR166C 2616 nt-0.59□□□□□ -2.5
GDT1P38301 tQ(UUG)QtQ(UUG)Q 76 nt-0.61□□□□□ -2.51
GDT1P38301 Q0142Q0142 177 nt-0.62□□□□□ -2.51
GDT1P38301 YNL067W-BYNL067W-B 141 nt-0.63□□□□□ -2.51
GDT1P38301 snR52snR52 92 nt-0.63□□□□□ -2.51
GDT1P38301 URB1YKL014C 5295 nt-0.63□□□□□ -2.51
GDT1P38301 YIL071W-AYIL071W-A 477 nt-0.65□□□□□ -2.51
GDT1P38301 PMP2YEL017C-A 132 nt-0.66□□□□□ -2.52
GDT1P38301 snR48snR48 113 nt-0.67□□□□□ -2.52
GDT1P38301 tA(UGC)QtA(UGC)Q 76 nt-0.7□□□□□ -2.52
GDT1P38301 tL(UAA)QtL(UAA)Q 85 nt-0.71□□□□□ -2.52
GDT1P38301 RDS3YPR094W 324 nt-0.71□□□□□ -2.52
GDT1P38301 YER090C-AYER090C-A 90 nt-0.72□□□□□ -2.52
GDT1P38301 YLR342W-AYLR342W-A 174 nt-0.73□□□□□ -2.53
GDT1P38301 snR50snR50 90 nt-0.73□□□□□ -2.53
GDT1P38301 YNL266WYNL266W 420 nt-0.74□□□□□ -2.53
GDT1P38301 JLP2YMR132C 627 nt-0.75□□□□□ -2.53
GDT1P38301 PAU9YBL108C-A 129 nt-0.76□□□□□ -2.53
GDT1P38301 YJL113WYJL113W 4647 nt-0.78□□□□□ -2.53
GDT1P38301 tD(GUC)QtD(GUC)Q 75 nt-0.82□□□□□ -2.54
GDT1P38301 YNL205CYNL205C 423 nt-0.85□□□□□ -2.55
GDT1P38301 YHL009W-BYHL009W-B 5409 nt-0.85□□□□□ -2.55
GDT1P38301 YHL015W-AYHL015W-A 84 nt-0.87□□□□□ -2.55
GDT1P38301 YOR102WYOR102W 351 nt-0.87□□□□□ -2.55
GDT1P38301 YBR178WYBR178W 375 nt-0.87□□□□□ -2.55
GDT1P38301 YDR406W-AYDR406W-A 246 nt-0.9□□□□□ -2.55
GDT1P38301 YLR286W-AYLR286W-A 135 nt-0.9□□□□□ -2.55
GDT1P38301 snR33snR33 183 nt-0.91□□□□□ -2.56
GDT1P38301 YJL150WYJL150W 303 nt-0.94□□□□□ -2.56
GDT1P38301 YNL198CYNL198C 303 nt-0.95□□□□□ -2.56
GDT1P38301 YDL159C-BYDL159C-B 177 nt-0.97□□□□□ -2.56
GDT1P38301 YBL053WYBL053W 375 nt-0.98□□□□□ -2.57
GDT1P38301 snR67snR67 82 nt-1□□□□□ -2.57
GDT1P38301 tT(UGU)G1tT(UGU)G1 72 nt-1.02□□□□□ -2.57
GDT1P38301 tT(UGU)G2tT(UGU)G2 72 nt-1.02□□□□□ -2.57
GDT1P38301 tT(UGU)PtT(UGU)P 72 nt-1.02□□□□□ -2.57
GDT1P38301 SKI7YOR076C 2244 nt-1.04□□□□□ -2.58
GDT1P38301 YMR046W-AYMR046W-A 129 nt-1.11□□□□□ -2.59
GDT1P38301 YBR196C-AYBR196C-A 150 nt-1.12□□□□□ -2.59
GDT1P38301 SPG3YDR504C 384 nt-1.14□□□□□ -2.59
GDT1P38301 YLR299C-AYLR299C-A 93 nt-1.15□□□□□ -2.59
GDT1P38301 snR161snR161 161 nt-1.22□□□□□ -2.6
GDT1P38301 SOM1YEL059C-A 225 nt-1.24□□□□□ -2.61
GDT1P38301 YML054C-AYML054C-A 159 nt-1.31□□□□□ -2.62
GDT1P38301 tM(CAU)Q1tM(CAU)Q1 76 nt-1.34□□□□□ -2.62
GDT1P38301 tP(UGG)QtP(UGG)Q 72 nt-1.34□□□□□ -2.62
GDT1P38301 YCR095W-AYCR095W-A 159 nt-1.36□□□□□ -2.63
GDT1P38301 YBR223W-AYBR223W-A 120 nt-1.4□□□□□ -2.63
GDT1P38301 YLR466C-BYLR466C-B 117 nt-1.43□□□□□ -2.64
GDT1P38301 YHR180C-BYHR180C-B 105 nt-1.46□□□□□ -2.64
GDT1P38301 YGR151CYGR151C 336 nt-1.5□□□□□ -2.65
GDT1P38301 YNL338WYNL338W 159 nt-1.56□□□□□ -2.66
GDT1P38301 YOR376W-AYOR376W-A 156 nt-1.56□□□□□ -2.66
GDT1P38301 YCL001W-BYCL001W-B 255 nt-1.58□□□□□ -2.66
GDT1P38301 snR77snR77 88 nt-1.62□□□□□ -2.67
GDT1P38301 CDC65tQ(CUG)M 72 nt-1.66□□□□□ -2.68
GDT1P38301 YOL083C-AYOL083C-A 141 nt-1.66□□□□□ -2.68
GDT1P38301 YBL071C-BYBL071C-B 99 nt-1.67□□□□□ -2.68
GDT1P38301 YBR109W-AYBR109W-A 225 nt-1.69□□□□□ -2.68
GDT1P38301 YGR240C-AYGR240C-A 201 nt-1.71□□□□□ -2.68
GDT1P38301 tY(GUA)QtY(GUA)Q 84 nt-1.74□□□□□ -2.69
GDT1P38301 YBR296C-AYBR296C-A 120 nt-1.76□□□□□ -2.69
GDT1P38301 YKL106C-AYKL106C-A 120 nt-1.78□□□□□ -2.69
GDT1P38301 RPL41AYDL184C 78 nt-1.79□□□□□ -2.7
GDT1P38301 snR38snR38 95 nt-1.79□□□□□ -2.7
GDT1P38301 YOL164W-AYOL164W-A 183 nt-1.8□□□□□ -2.7
GDT1P38301 YOR316C-AYOR316C-A 210 nt-1.82□□□□□ -2.7
GDT1P38301 YAL037C-AYAL037C-A 93 nt-1.83□□□□□ -2.7
GDT1P38301 YNL337WYNL337W 255 nt-1.85□□□□□ -2.71
GDT1P38301 YNR077CYNR077C 255 nt-1.86□□□□□ -2.71
GDT1P38301 snR81snR81 201 nt-1.89□□□□□ -2.71
GDT1P38301 YMR315W-AYMR315W-A 108 nt-1.91□□□□□ -2.72
GDT1P38301 snR47snR47 99 nt-1.92□□□□□ -2.72
GDT1P38301 Q0032Q0032 291 nt-1.94□□□□□ -2.72
GDT1P38301 YGL007C-AYGL007C-A 87 nt-1.96□□□□□ -2.72
GDT1P38301 YBL100W-CYBL100W-C 120 nt-2.06□□□□□ -2.74
GDT1P38301 tS(GCU)Q1tS(GCU)Q1 86 nt-2.15□□□□□ -2.75
GDT1P38301 YGL041C-BYGL041C-B 183 nt-2.24□□□□□ -2.77
GDT1P38301 YNL103W-AYNL103W-A 90 nt-2.24□□□□□ -2.77
GDT1P38301 YKL225WYKL225W 348 nt-2.25□□□□□ -2.77
GDT1P38301 YOR309CYOR309C 381 nt-2.25□□□□□ -2.77
GDT1P38301 YLR294CYLR294C 330 nt-2.31□□□□□ -2.78
GDT1P38301 YOR225WYOR225W 330 nt-2.31□□□□□ -2.78
GDT1P38301 snR61snR61 90 nt-2.32□□□□□ -2.78
GDT1P38301 snR6snR6 112 nt-2.42□□□□□ -2.8
GDT1P38301 YBR126W-BYBR126W-B 144 nt-2.43□□□□□ -2.8
GDT1P38301 YDR034C-AYDR034C-A 177 nt-2.44□□□□□ -2.8
GDT1P38301 YNL170WYNL170W 396 nt-2.44□□□□□ -2.8
GDT1P38301 tV(UAC)QtV(UAC)Q 76 nt-2.5□□□□□ -2.81
GDT1P38301 snR62snR62 100 nt-2.52□□□□□ -2.81
Retrieved 100 of 7,029 protein–RNA pairs in 57.1 ms