Protein–RNA interactions for Protein: P38205

NCL1, Multisite-specific tRNA:(cytosine-C(5))-methyltransferase, yeastyeast

Known RBP Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NCL1P38205 NUP192YJL039C 5052 nt1.45□□□□□ -2.18
NCL1P38205 RPL41AYDL184C 78 nt1.45□□□□□ -2.18
NCL1P38205 NIP1YMR309C 2439 nt1.45□□□□□ -2.18
NCL1P38205 PAU12YGR294W 363 nt1.43□□□□□ -2.18
NCL1P38205 BUL2YML111W 2763 nt1.43□□□□□ -2.18
NCL1P38205 YGR130CYGR130C 2451 nt1.43□□□□□ -2.18
NCL1P38205 YJL077W-AYJL077W-A 87 nt1.42□□□□□ -2.18
NCL1P38205 YLR149C-AYLR149C-A 87 nt1.42□□□□□ -2.18
NCL1P38205 YBR296C-AYBR296C-A 120 nt1.42□□□□□ -2.18
NCL1P38205 AI1Q0050 2505 nt1.42□□□□□ -2.18
NCL1P38205 SIP4YJL089W 2490 nt1.42□□□□□ -2.18
NCL1P38205 YDL159W-AYDL159W-A 132 nt1.4□□□□□ -2.19
NCL1P38205 FYV8YGR196C 2454 nt1.37□□□□□ -2.19
NCL1P38205 SPT7YBR081C 3999 nt1.37□□□□□ -2.19
NCL1P38205 YNL054W-BYNL054W-B 5250 nt1.36□□□□□ -2.19
NCL1P38205 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
NCL1P38205 tH(GUG)E1tH(GUG)E1 72 nt1.35□□□□□ -2.19
NCL1P38205 tH(GUG)E2tH(GUG)E2 72 nt1.35□□□□□ -2.19
NCL1P38205 tH(GUG)G1tH(GUG)G1 72 nt1.35□□□□□ -2.19
NCL1P38205 tH(GUG)G2tH(GUG)G2 72 nt1.35□□□□□ -2.19
NCL1P38205 tH(GUG)HtH(GUG)H 72 nt1.35□□□□□ -2.19
NCL1P38205 tH(GUG)KtH(GUG)K 72 nt1.35□□□□□ -2.19
NCL1P38205 tH(GUG)MtH(GUG)M 72 nt1.35□□□□□ -2.19
NCL1P38205 YNL284C-BYNL284C-B 5268 nt1.33□□□□□ -2.2
NCL1P38205 YKL096C-BYKL096C-B 150 nt1.33□□□□□ -2.2
NCL1P38205 tQ(UUG)QtQ(UUG)Q 76 nt1.32□□□□□ -2.2
NCL1P38205 SKI7YOR076C 2244 nt1.31□□□□□ -2.2
NCL1P38205 MYO1YHR023W 5787 nt1.28□□□□□ -2.2
NCL1P38205 RKR1YMR247C 4689 nt1.26□□□□□ -2.21
NCL1P38205 YER090C-AYER090C-A 90 nt1.25□□□□□ -2.21
NCL1P38205 BUD3YCL014W 4911 nt1.25□□□□□ -2.21
NCL1P38205 YGR122C-AYGR122C-A 129 nt1.24□□□□□ -2.21
NCL1P38205 YOR192C-BYOR192C-B 5313 nt1.22□□□□□ -2.21
NCL1P38205 YPR117WYPR117W 7470 nt1.22□□□□□ -2.21
NCL1P38205 YER078W-AYER078W-A 165 nt1.2□□□□□ -2.22
NCL1P38205 snR75snR75 89 nt1.17□□□□□ -2.22
NCL1P38205 VAM6YDL077C 3150 nt1.14□□□□□ -2.23
NCL1P38205 BEM2YER155C 6504 nt1.13□□□□□ -2.23
NCL1P38205 IML1YJR138W 4755 nt1.13□□□□□ -2.23
NCL1P38205 YJR029WYJR029W 5268 nt1.12□□□□□ -2.23
NCL1P38205 YPR137C-BYPR137C-B 5268 nt1.12□□□□□ -2.23
NCL1P38205 SCC2YDR180W 4482 nt1.11□□□□□ -2.23
NCL1P38205 tV(UAC)BtV(UAC)B 74 nt1.11□□□□□ -2.23
NCL1P38205 tV(UAC)DtV(UAC)D 74 nt1.11□□□□□ -2.23
NCL1P38205 snR67snR67 82 nt1.06□□□□□ -2.24
NCL1P38205 PET111YMR257C 2403 nt1.05□□□□□ -2.24
NCL1P38205 PAU24YBR301W 363 nt1.04□□□□□ -2.24
NCL1P38205 YBL100W-BYBL100W-B 5313 nt1.01□□□□□ -2.25
NCL1P38205 LTE1YAL024C 4308 nt1.01□□□□□ -2.25
NCL1P38205 EMT1tM(CAU)D 73 nt0.99□□□□□ -2.25
NCL1P38205 EMT5tM(CAU)J1 73 nt0.99□□□□□ -2.25
NCL1P38205 EMT3tM(CAU)J2 73 nt0.99□□□□□ -2.25
NCL1P38205 EMT4tM(CAU)M 73 nt0.99□□□□□ -2.25
NCL1P38205 EMT2tM(CAU)O2 73 nt0.99□□□□□ -2.25
NCL1P38205 YMR160WYMR160W 2451 nt0.98□□□□□ -2.25
NCL1P38205 DOP1YDR141C 5097 nt0.97□□□□□ -2.25
NCL1P38205 MLP2YIL149C 5040 nt0.88□□□□□ -2.27
NCL1P38205 YKL106C-AYKL106C-A 120 nt0.85□□□□□ -2.27
NCL1P38205 MLP1YKR095W 5628 nt0.84□□□□□ -2.27
NCL1P38205 YDL114W-AYDL114W-A 114 nt0.81□□□□□ -2.28
NCL1P38205 tV(UAC)QtV(UAC)Q 76 nt0.77□□□□□ -2.29
NCL1P38205 IQG1YPL242C 4488 nt0.74□□□□□ -2.29
NCL1P38205 YML100W-AYML100W-A 174 nt0.74□□□□□ -2.29
NCL1P38205 YPR159C-AYPR159C-A 102 nt0.74□□□□□ -2.29
NCL1P38205 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
NCL1P38205 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
NCL1P38205 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
NCL1P38205 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
NCL1P38205 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
NCL1P38205 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
NCL1P38205 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
NCL1P38205 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
NCL1P38205 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
NCL1P38205 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
NCL1P38205 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
NCL1P38205 YOR186C-AYOR186C-A 210 nt0.73□□□□□ -2.29
NCL1P38205 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
NCL1P38205 YOR376W-AYOR376W-A 156 nt0.65□□□□□ -2.31
NCL1P38205 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
NCL1P38205 SOV1YMR066W 2697 nt0.62□□□□□ -2.31
NCL1P38205 ESP1YGR098C 4893 nt0.56□□□□□ -2.32
NCL1P38205 YOR316C-AYOR316C-A 210 nt0.55□□□□□ -2.32
NCL1P38205 THO2YNL139C 4794 nt0.53□□□□□ -2.33
NCL1P38205 snR77snR77 88 nt0.5□□□□□ -2.33
NCL1P38205 FMP27YLR454W 7887 nt0.5□□□□□ -2.33
NCL1P38205 UTP20YBL004W 7482 nt0.47□□□□□ -2.33
NCL1P38205 SBH2YER019C-A 267 nt0.45□□□□□ -2.34
NCL1P38205 tF(GAA)BtF(GAA)B 73 nt0.43□□□□□ -2.34
NCL1P38205 tF(GAA)FtF(GAA)F 73 nt0.43□□□□□ -2.34
NCL1P38205 tF(GAA)GtF(GAA)G 73 nt0.43□□□□□ -2.34
NCL1P38205 tF(GAA)H1tF(GAA)H1 73 nt0.43□□□□□ -2.34
NCL1P38205 tF(GAA)H2tF(GAA)H2 73 nt0.43□□□□□ -2.34
NCL1P38205 tF(GAA)MtF(GAA)M 73 nt0.43□□□□□ -2.34
NCL1P38205 tF(GAA)P1tF(GAA)P1 73 nt0.43□□□□□ -2.34
NCL1P38205 tF(GAA)P2tF(GAA)P2 73 nt0.43□□□□□ -2.34
NCL1P38205 snR128snR128 126 nt0.42□□□□□ -2.34
NCL1P38205 YKL145W-AYKL145W-A 93 nt0.4□□□□□ -2.35
NCL1P38205 snR40snR40 97 nt0.39□□□□□ -2.35
NCL1P38205 PAU9YBL108C-A 129 nt0.38□□□□□ -2.35
NCL1P38205 YOL013W-AYOL013W-A 192 nt0.37□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms