Protein–RNA interactions for Protein: P35203

CTF13, Centromere DNA-binding protein complex CBF3 subunit C, yeastyeast

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTF13P35203 tD(GUC)QtD(GUC)Q 75 nt1.06□□□□□ -2.24
CTF13P35203 YBL100W-CYBL100W-C 120 nt1.06□□□□□ -2.24
CTF13P35203 BUD3YCL014W 4911 nt1.05□□□□□ -2.24
CTF13P35203 EST1YLR233C 2100 nt1.05□□□□□ -2.24
CTF13P35203 YOL164W-AYOL164W-A 183 nt1.05□□□□□ -2.24
CTF13P35203 snR69snR69 101 nt1.04□□□□□ -2.24
CTF13P35203 YPR117WYPR117W 7470 nt1.04□□□□□ -2.24
CTF13P35203 YDR034C-AYDR034C-A 177 nt1.01□□□□□ -2.25
CTF13P35203 NIP1YMR309C 2439 nt1.01□□□□□ -2.25
CTF13P35203 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
CTF13P35203 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
CTF13P35203 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
CTF13P35203 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
CTF13P35203 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
CTF13P35203 YGR240C-AYGR240C-A 201 nt1□□□□□ -2.25
CTF13P35203 SCC2YDR180W 4482 nt0.98□□□□□ -2.25
CTF13P35203 YLR299C-AYLR299C-A 93 nt0.98□□□□□ -2.25
CTF13P35203 MYO1YHR023W 5787 nt0.98□□□□□ -2.25
CTF13P35203 YOR192C-BYOR192C-B 5313 nt0.97□□□□□ -2.25
CTF13P35203 RDS3YPR094W 324 nt0.96□□□□□ -2.26
CTF13P35203 BEM2YER155C 6504 nt0.96□□□□□ -2.26
CTF13P35203 YDL159C-BYDL159C-B 177 nt0.95□□□□□ -2.26
CTF13P35203 snR47snR47 99 nt0.95□□□□□ -2.26
CTF13P35203 BUL2YML111W 2763 nt0.94□□□□□ -2.26
CTF13P35203 PAU12YGR294W 363 nt0.92□□□□□ -2.26
CTF13P35203 YJL077W-AYJL077W-A 87 nt0.92□□□□□ -2.26
CTF13P35203 ORC3YLL004W 1851 nt0.88□□□□□ -2.27
CTF13P35203 PAU24YBR301W 363 nt0.88□□□□□ -2.27
CTF13P35203 tQ(UUG)QtQ(UUG)Q 76 nt0.87□□□□□ -2.27
CTF13P35203 PET111YMR257C 2403 nt0.86□□□□□ -2.27
CTF13P35203 YPL060C-AYPL060C-A 3315 nt0.85□□□□□ -2.27
CTF13P35203 YDR371C-AYDR371C-A 105 nt0.85□□□□□ -2.27
CTF13P35203 YML054C-AYML054C-A 159 nt0.83□□□□□ -2.28
CTF13P35203 YHR180C-BYHR180C-B 105 nt0.8□□□□□ -2.28
CTF13P35203 YPR159C-AYPR159C-A 102 nt0.75□□□□□ -2.29
CTF13P35203 snR50snR50 90 nt0.75□□□□□ -2.29
CTF13P35203 LTE1YAL024C 4308 nt0.74□□□□□ -2.29
CTF13P35203 YER090C-AYER090C-A 90 nt0.73□□□□□ -2.29
CTF13P35203 YBR109W-AYBR109W-A 225 nt0.73□□□□□ -2.29
CTF13P35203 YNL054W-BYNL054W-B 5250 nt0.73□□□□□ -2.29
CTF13P35203 RPL41AYDL184C 78 nt0.72□□□□□ -2.29
CTF13P35203 snR64snR64 101 nt0.71□□□□□ -2.3
CTF13P35203 tT(AGU)BtT(AGU)B 73 nt0.7□□□□□ -2.3
CTF13P35203 tT(AGU)CtT(AGU)C 73 nt0.7□□□□□ -2.3
CTF13P35203 tT(AGU)DtT(AGU)D 73 nt0.7□□□□□ -2.3
CTF13P35203 tT(AGU)HtT(AGU)H 73 nt0.7□□□□□ -2.3
CTF13P35203 tT(AGU)I1tT(AGU)I1 73 nt0.7□□□□□ -2.3
CTF13P35203 tT(AGU)I2tT(AGU)I2 73 nt0.7□□□□□ -2.3
CTF13P35203 tT(AGU)JtT(AGU)J 73 nt0.7□□□□□ -2.3
CTF13P35203 tT(AGU)N1tT(AGU)N1 73 nt0.7□□□□□ -2.3
CTF13P35203 tT(AGU)N2tT(AGU)N2 73 nt0.7□□□□□ -2.3
CTF13P35203 tT(AGU)O1tT(AGU)O1 73 nt0.7□□□□□ -2.3
CTF13P35203 tT(AGU)O2tT(AGU)O2 73 nt0.7□□□□□ -2.3
CTF13P35203 YKL225WYKL225W 348 nt0.7□□□□□ -2.3
CTF13P35203 AI1Q0050 2505 nt0.69□□□□□ -2.3
CTF13P35203 YMR160WYMR160W 2451 nt0.68□□□□□ -2.3
CTF13P35203 YBR296C-AYBR296C-A 120 nt0.68□□□□□ -2.3
CTF13P35203 UTP20YBL004W 7482 nt0.67□□□□□ -2.3
CTF13P35203 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
CTF13P35203 snR53snR53 91 nt0.65□□□□□ -2.31
CTF13P35203 UTP10YJL109C 5310 nt0.65□□□□□ -2.31
CTF13P35203 YBL100W-BYBL100W-B 5313 nt0.65□□□□□ -2.31
CTF13P35203 snR38snR38 95 nt0.63□□□□□ -2.31
CTF13P35203 MLP1YKR095W 5628 nt0.62□□□□□ -2.31
CTF13P35203 tF(GAA)BtF(GAA)B 73 nt0.61□□□□□ -2.31
CTF13P35203 tF(GAA)FtF(GAA)F 73 nt0.61□□□□□ -2.31
CTF13P35203 tF(GAA)GtF(GAA)G 73 nt0.61□□□□□ -2.31
CTF13P35203 tF(GAA)H1tF(GAA)H1 73 nt0.61□□□□□ -2.31
CTF13P35203 tF(GAA)H2tF(GAA)H2 73 nt0.61□□□□□ -2.31
CTF13P35203 tF(GAA)MtF(GAA)M 73 nt0.61□□□□□ -2.31
CTF13P35203 tF(GAA)P1tF(GAA)P1 73 nt0.61□□□□□ -2.31
CTF13P35203 tF(GAA)P2tF(GAA)P2 73 nt0.61□□□□□ -2.31
CTF13P35203 snR67snR67 82 nt0.59□□□□□ -2.31
CTF13P35203 YKL145W-AYKL145W-A 93 nt0.55□□□□□ -2.32
CTF13P35203 YOR186C-AYOR186C-A 210 nt0.55□□□□□ -2.32
CTF13P35203 YOL014WYOL014W 375 nt0.51□□□□□ -2.33
CTF13P35203 SKI7YOR076C 2244 nt0.47□□□□□ -2.33
CTF13P35203 FMP27YLR454W 7887 nt0.47□□□□□ -2.33
CTF13P35203 IQG1YPL242C 4488 nt0.46□□□□□ -2.34
CTF13P35203 YDL159W-AYDL159W-A 132 nt0.44□□□□□ -2.34
CTF13P35203 MLP2YIL149C 5040 nt0.44□□□□□ -2.34
CTF13P35203 YML100W-AYML100W-A 174 nt0.39□□□□□ -2.35
CTF13P35203 THO2YNL139C 4794 nt0.38□□□□□ -2.35
CTF13P35203 SOV1YMR066W 2697 nt0.37□□□□□ -2.35
CTF13P35203 YGR122C-AYGR122C-A 129 nt0.36□□□□□ -2.35
CTF13P35203 YOL013W-AYOL013W-A 192 nt0.3□□□□□ -2.36
CTF13P35203 snR128snR128 126 nt0.3□□□□□ -2.36
CTF13P35203 YKL106C-AYKL106C-A 120 nt0.29□□□□□ -2.36
CTF13P35203 YLR149C-AYLR149C-A 87 nt0.28□□□□□ -2.36
CTF13P35203 YER078W-AYER078W-A 165 nt0.22□□□□□ -2.37
CTF13P35203 ESP1YGR098C 4893 nt0.21□□□□□ -2.38
CTF13P35203 PAU9YBL108C-A 129 nt0.19□□□□□ -2.38
CTF13P35203 YOR376W-AYOR376W-A 156 nt0.13□□□□□ -2.39
CTF13P35203 YKL096C-BYKL096C-B 150 nt0.12□□□□□ -2.39
CTF13P35203 YDL114W-AYDL114W-A 114 nt0.09□□□□□ -2.4
CTF13P35203 YOR316C-AYOR316C-A 210 nt0.02□□□□□ -2.41
CTF13P35203 tA(UGC)QtA(UGC)Q 76 nt0.01□□□□□ -2.41
CTF13P35203 tV(UAC)QtV(UAC)Q 76 nt0.01□□□□□ -2.41
CTF13P35203 SBH2YER019C-A 267 nt-0.04□□□□□ -2.42
CTF13P35203 snR77snR77 88 nt-0.08□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 81.3 ms