Protein–RNA interactions for Protein: P32343

SSH4, Protein SSH4, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH4P32343 YDR210WYDR210W 228 nt-0.02□□□□□ -2.41
SSH4P32343 tM(CAU)Q2tM(CAU)Q2 78 nt-0.02□□□□□ -2.41
SSH4P32343 YDR406W-AYDR406W-A 246 nt-0.06□□□□□ -2.42
SSH4P32343 snR48snR48 113 nt-0.07□□□□□ -2.42
SSH4P32343 YMR046W-AYMR046W-A 129 nt-0.08□□□□□ -2.42
SSH4P32343 snR128snR128 126 nt-0.08□□□□□ -2.42
SSH4P32343 YGR146C-AYGR146C-A 162 nt-0.1□□□□□ -2.43
SSH4P32343 YOR329W-AYOR329W-A 210 nt-0.11□□□□□ -2.43
SSH4P32343 YJL077W-AYJL077W-A 87 nt-0.12□□□□□ -2.43
SSH4P32343 snR39BsnR39B 96 nt-0.12□□□□□ -2.43
SSH4P32343 SPG3YDR504C 384 nt-0.13□□□□□ -2.43
SSH4P32343 TFB5YDR079C-A 219 nt-0.16□□□□□ -2.44
SSH4P32343 JLP2YMR132C 627 nt-0.2□□□□□ -2.44
SSH4P32343 YGR164WYGR164W 336 nt-0.21□□□□□ -2.44
SSH4P32343 tM(CAU)Q1tM(CAU)Q1 76 nt-0.22□□□□□ -2.44
SSH4P32343 YDL007C-AYDL007C-A 258 nt-0.24□□□□□ -2.45
SSH4P32343 snR69snR69 101 nt-0.24□□□□□ -2.45
SSH4P32343 tL(UAA)QtL(UAA)Q 85 nt-0.24□□□□□ -2.45
SSH4P32343 YHL015W-AYHL015W-A 84 nt-0.24□□□□□ -2.45
SSH4P32343 YJL150WYJL150W 303 nt-0.25□□□□□ -2.45
SSH4P32343 YOR102WYOR102W 351 nt-0.25□□□□□ -2.45
SSH4P32343 SBH2YER019C-A 267 nt-0.26□□□□□ -2.45
SSH4P32343 PMP2YEL017C-A 132 nt-0.28□□□□□ -2.45
SSH4P32343 YNL067W-BYNL067W-B 141 nt-0.31□□□□□ -2.46
SSH4P32343 tQ(UUG)QtQ(UUG)Q 76 nt-0.33□□□□□ -2.46
SSH4P32343 YNL205CYNL205C 423 nt-0.34□□□□□ -2.46
SSH4P32343 RDS3YPR094W 324 nt-0.35□□□□□ -2.47
SSH4P32343 YML100W-AYML100W-A 174 nt-0.37□□□□□ -2.47
SSH4P32343 YJL113WYJL113W 4647 nt-0.4□□□□□ -2.47
SSH4P32343 YNL198CYNL198C 303 nt-0.4□□□□□ -2.47
SSH4P32343 SEC10YLR166C 2616 nt-0.4□□□□□ -2.47
SSH4P32343 YIL071W-AYIL071W-A 477 nt-0.42□□□□□ -2.48
SSH4P32343 YER090C-AYER090C-A 90 nt-0.43□□□□□ -2.48
SSH4P32343 tD(GUC)QtD(GUC)Q 75 nt-0.46□□□□□ -2.48
SSH4P32343 URB1YKL014C 5295 nt-0.49□□□□□ -2.49
SSH4P32343 PAU9YBL108C-A 129 nt-0.5□□□□□ -2.49
SSH4P32343 YBL053WYBL053W 375 nt-0.54□□□□□ -2.5
SSH4P32343 YNL266WYNL266W 420 nt-0.54□□□□□ -2.5
SSH4P32343 tA(UGC)QtA(UGC)Q 76 nt-0.56□□□□□ -2.5
SSH4P32343 snR50snR50 90 nt-0.56□□□□□ -2.5
SSH4P32343 YLR286W-AYLR286W-A 135 nt-0.57□□□□□ -2.5
SSH4P32343 YLR466C-BYLR466C-B 117 nt-0.57□□□□□ -2.5
SSH4P32343 YBR178WYBR178W 375 nt-0.57□□□□□ -2.5
SSH4P32343 YHL009W-BYHL009W-B 5409 nt-0.61□□□□□ -2.51
SSH4P32343 YDL159C-BYDL159C-B 177 nt-0.62□□□□□ -2.51
SSH4P32343 tT(UGU)G1tT(UGU)G1 72 nt-0.62□□□□□ -2.51
SSH4P32343 tT(UGU)G2tT(UGU)G2 72 nt-0.62□□□□□ -2.51
SSH4P32343 tT(UGU)PtT(UGU)P 72 nt-0.62□□□□□ -2.51
SSH4P32343 YGR151CYGR151C 336 nt-0.63□□□□□ -2.51
SSH4P32343 snR33snR33 183 nt-0.66□□□□□ -2.52
SSH4P32343 SOM1YEL059C-A 225 nt-0.67□□□□□ -2.52
SSH4P32343 YCR095W-AYCR095W-A 159 nt-0.68□□□□□ -2.52
SSH4P32343 snR161snR161 161 nt-0.68□□□□□ -2.52
SSH4P32343 YBR196C-AYBR196C-A 150 nt-0.68□□□□□ -2.52
SSH4P32343 YNL337WYNL337W 255 nt-0.71□□□□□ -2.52
SSH4P32343 snR67snR67 82 nt-0.72□□□□□ -2.52
SSH4P32343 YLR299C-AYLR299C-A 93 nt-0.77□□□□□ -2.53
SSH4P32343 YNL338WYNL338W 159 nt-0.79□□□□□ -2.54
SSH4P32343 Q0032Q0032 291 nt-0.81□□□□□ -2.54
SSH4P32343 YNR077CYNR077C 255 nt-0.9□□□□□ -2.55
SSH4P32343 SKI7YOR076C 2244 nt-0.91□□□□□ -2.55
SSH4P32343 YGL007C-AYGL007C-A 87 nt-0.92□□□□□ -2.56
SSH4P32343 tP(UGG)QtP(UGG)Q 72 nt-0.93□□□□□ -2.56
SSH4P32343 YBR223W-AYBR223W-A 120 nt-0.93□□□□□ -2.56
SSH4P32343 YCL001W-BYCL001W-B 255 nt-0.98□□□□□ -2.57
SSH4P32343 YML054C-AYML054C-A 159 nt-1.03□□□□□ -2.57
SSH4P32343 YHR180C-BYHR180C-B 105 nt-1.06□□□□□ -2.58
SSH4P32343 snR77snR77 88 nt-1.23□□□□□ -2.61
SSH4P32343 YOR225WYOR225W 330 nt-1.23□□□□□ -2.61
SSH4P32343 CDC65tQ(CUG)M 72 nt-1.25□□□□□ -2.61
SSH4P32343 YOL083C-AYOL083C-A 141 nt-1.25□□□□□ -2.61
SSH4P32343 tY(GUA)QtY(GUA)Q 84 nt-1.27□□□□□ -2.61
SSH4P32343 YAL037C-AYAL037C-A 93 nt-1.27□□□□□ -2.61
SSH4P32343 YBL071C-BYBL071C-B 99 nt-1.28□□□□□ -2.61
SSH4P32343 YOR376W-AYOR376W-A 156 nt-1.29□□□□□ -2.62
SSH4P32343 YGR240C-AYGR240C-A 201 nt-1.3□□□□□ -2.62
SSH4P32343 YLR294CYLR294C 330 nt-1.3□□□□□ -2.62
SSH4P32343 RPL41AYDL184C 78 nt-1.33□□□□□ -2.62
SSH4P32343 YBR296C-AYBR296C-A 120 nt-1.34□□□□□ -2.62
SSH4P32343 YKL106C-AYKL106C-A 120 nt-1.35□□□□□ -2.63
SSH4P32343 YMR315W-AYMR315W-A 108 nt-1.36□□□□□ -2.63
SSH4P32343 snR81snR81 201 nt-1.37□□□□□ -2.63
SSH4P32343 YOL164W-AYOL164W-A 183 nt-1.37□□□□□ -2.63
SSH4P32343 YBR109W-AYBR109W-A 225 nt-1.38□□□□□ -2.63
SSH4P32343 YOR316C-AYOR316C-A 210 nt-1.43□□□□□ -2.64
SSH4P32343 YBL100W-CYBL100W-C 120 nt-1.46□□□□□ -2.64
SSH4P32343 snR47snR47 99 nt-1.49□□□□□ -2.65
SSH4P32343 snR38snR38 95 nt-1.52□□□□□ -2.65
SSH4P32343 YNL170WYNL170W 396 nt-1.56□□□□□ -2.66
SSH4P32343 YOR309CYOR309C 381 nt-1.58□□□□□ -2.66
SSH4P32343 snR61snR61 90 nt-1.62□□□□□ -2.67
SSH4P32343 YGL041C-BYGL041C-B 183 nt-1.66□□□□□ -2.68
SSH4P32343 YNL103W-AYNL103W-A 90 nt-1.66□□□□□ -2.68
SSH4P32343 ATP8Q0080 147 nt-1.73□□□□□ -2.69
SSH4P32343 tS(GCU)Q1tS(GCU)Q1 86 nt-1.73□□□□□ -2.69
SSH4P32343 YBR126W-BYBR126W-B 144 nt-1.73□□□□□ -2.69
SSH4P32343 YKL225WYKL225W 348 nt-1.76□□□□□ -2.69
SSH4P32343 snR6snR6 112 nt-1.88□□□□□ -2.71
SSH4P32343 YDR034C-AYDR034C-A 177 nt-1.89□□□□□ -2.71
SSH4P32343 snR62snR62 100 nt-1.95□□□□□ -2.72
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms