Protein–RNA interactions for Protein: P31412

VMA5, V-type proton ATPase subunit C, yeastyeast

Known RBP Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA5P31412 YJL077W-AYJL077W-A 87 nt-0.42□□□□□ -2.48
VMA5P31412 tM(CAU)Q2tM(CAU)Q2 78 nt-0.44□□□□□ -2.48
VMA5P31412 snR80snR80 171 nt-0.46□□□□□ -2.48
VMA5P31412 snR46snR46 197 nt-0.46□□□□□ -2.48
VMA5P31412 YML100W-AYML100W-A 174 nt-0.47□□□□□ -2.48
VMA5P31412 snR69snR69 101 nt-0.49□□□□□ -2.49
VMA5P31412 YGR146C-AYGR146C-A 162 nt-0.49□□□□□ -2.49
VMA5P31412 YOR329W-AYOR329W-A 210 nt-0.5□□□□□ -2.49
VMA5P31412 URB1YKL014C 5295 nt-0.5□□□□□ -2.49
VMA5P31412 snR39BsnR39B 96 nt-0.51□□□□□ -2.49
VMA5P31412 Q0142Q0142 177 nt-0.52□□□□□ -2.49
VMA5P31412 YDL007C-AYDL007C-A 258 nt-0.54□□□□□ -2.5
VMA5P31412 SEC10YLR166C 2616 nt-0.54□□□□□ -2.5
VMA5P31412 tQ(UUG)QtQ(UUG)Q 76 nt-0.56□□□□□ -2.5
VMA5P31412 YIL071W-AYIL071W-A 477 nt-0.57□□□□□ -2.5
VMA5P31412 snR48snR48 113 nt-0.57□□□□□ -2.5
VMA5P31412 PMP2YEL017C-A 132 nt-0.59□□□□□ -2.5
VMA5P31412 snR52snR52 92 nt-0.6□□□□□ -2.51
VMA5P31412 RDS3YPR094W 324 nt-0.61□□□□□ -2.51
VMA5P31412 tA(UGC)QtA(UGC)Q 76 nt-0.62□□□□□ -2.51
VMA5P31412 YNL067W-BYNL067W-B 141 nt-0.62□□□□□ -2.51
VMA5P31412 YLR342W-AYLR342W-A 174 nt-0.63□□□□□ -2.51
VMA5P31412 YER090C-AYER090C-A 90 nt-0.65□□□□□ -2.51
VMA5P31412 tL(UAA)QtL(UAA)Q 85 nt-0.65□□□□□ -2.51
VMA5P31412 YJL113WYJL113W 4647 nt-0.68□□□□□ -2.52
VMA5P31412 YNL266WYNL266W 420 nt-0.68□□□□□ -2.52
VMA5P31412 snR50snR50 90 nt-0.69□□□□□ -2.52
VMA5P31412 PAU9YBL108C-A 129 nt-0.7□□□□□ -2.52
VMA5P31412 JLP2YMR132C 627 nt-0.73□□□□□ -2.53
VMA5P31412 YNL205CYNL205C 423 nt-0.73□□□□□ -2.53
VMA5P31412 tD(GUC)QtD(GUC)Q 75 nt-0.74□□□□□ -2.53
VMA5P31412 YHL015W-AYHL015W-A 84 nt-0.74□□□□□ -2.53
VMA5P31412 YHL009W-BYHL009W-B 5409 nt-0.77□□□□□ -2.53
VMA5P31412 YDR406W-AYDR406W-A 246 nt-0.78□□□□□ -2.53
VMA5P31412 YOR102WYOR102W 351 nt-0.78□□□□□ -2.53
VMA5P31412 YBR178WYBR178W 375 nt-0.8□□□□□ -2.54
VMA5P31412 YLR286W-AYLR286W-A 135 nt-0.81□□□□□ -2.54
VMA5P31412 YDL159C-BYDL159C-B 177 nt-0.87□□□□□ -2.55
VMA5P31412 YJL150WYJL150W 303 nt-0.87□□□□□ -2.55
VMA5P31412 snR67snR67 82 nt-0.88□□□□□ -2.55
VMA5P31412 YNL198CYNL198C 303 nt-0.91□□□□□ -2.56
VMA5P31412 tT(UGU)G1tT(UGU)G1 72 nt-0.92□□□□□ -2.56
VMA5P31412 tT(UGU)G2tT(UGU)G2 72 nt-0.92□□□□□ -2.56
VMA5P31412 tT(UGU)PtT(UGU)P 72 nt-0.92□□□□□ -2.56
VMA5P31412 YMR046W-AYMR046W-A 129 nt-0.93□□□□□ -2.56
VMA5P31412 snR33snR33 183 nt-0.93□□□□□ -2.56
VMA5P31412 YBL053WYBL053W 375 nt-0.97□□□□□ -2.56
VMA5P31412 SKI7YOR076C 2244 nt-0.97□□□□□ -2.57
VMA5P31412 YBR196C-AYBR196C-A 150 nt-0.98□□□□□ -2.57
VMA5P31412 YLR299C-AYLR299C-A 93 nt-1.02□□□□□ -2.57
VMA5P31412 SPG3YDR504C 384 nt-1.03□□□□□ -2.57
VMA5P31412 snR161snR161 161 nt-1.1□□□□□ -2.59
VMA5P31412 SOM1YEL059C-A 225 nt-1.11□□□□□ -2.59
VMA5P31412 tM(CAU)Q1tM(CAU)Q1 76 nt-1.13□□□□□ -2.59
VMA5P31412 YCR095W-AYCR095W-A 159 nt-1.19□□□□□ -2.6
VMA5P31412 YML054C-AYML054C-A 159 nt-1.19□□□□□ -2.6
VMA5P31412 YBR223W-AYBR223W-A 120 nt-1.21□□□□□ -2.6
VMA5P31412 YLR466C-BYLR466C-B 117 nt-1.3□□□□□ -2.62
VMA5P31412 YHR180C-BYHR180C-B 105 nt-1.31□□□□□ -2.62
VMA5P31412 YGR151CYGR151C 336 nt-1.32□□□□□ -2.62
VMA5P31412 tP(UGG)QtP(UGG)Q 72 nt-1.36□□□□□ -2.63
VMA5P31412 YNL338WYNL338W 159 nt-1.44□□□□□ -2.64
VMA5P31412 YOR376W-AYOR376W-A 156 nt-1.44□□□□□ -2.64
VMA5P31412 YCL001W-BYCL001W-B 255 nt-1.45□□□□□ -2.64
VMA5P31412 YNR077CYNR077C 255 nt-1.47□□□□□ -2.64
VMA5P31412 YGR240C-AYGR240C-A 201 nt-1.49□□□□□ -2.65
VMA5P31412 CDC65tQ(CUG)M 72 nt-1.5□□□□□ -2.65
VMA5P31412 YOL083C-AYOL083C-A 141 nt-1.51□□□□□ -2.65
VMA5P31412 snR77snR77 88 nt-1.52□□□□□ -2.65
VMA5P31412 YBL071C-BYBL071C-B 99 nt-1.53□□□□□ -2.65
VMA5P31412 YBR109W-AYBR109W-A 225 nt-1.55□□□□□ -2.66
VMA5P31412 YBR296C-AYBR296C-A 120 nt-1.56□□□□□ -2.66
VMA5P31412 YKL106C-AYKL106C-A 120 nt-1.59□□□□□ -2.66
VMA5P31412 RPL41AYDL184C 78 nt-1.6□□□□□ -2.67
VMA5P31412 YAL037C-AYAL037C-A 93 nt-1.61□□□□□ -2.67
VMA5P31412 YNL337WYNL337W 255 nt-1.62□□□□□ -2.67
VMA5P31412 YOR316C-AYOR316C-A 210 nt-1.62□□□□□ -2.67
VMA5P31412 YOL164W-AYOL164W-A 183 nt-1.64□□□□□ -2.67
VMA5P31412 snR38snR38 95 nt-1.65□□□□□ -2.67
VMA5P31412 Q0032Q0032 291 nt-1.67□□□□□ -2.68
VMA5P31412 snR81snR81 201 nt-1.71□□□□□ -2.68
VMA5P31412 YMR315W-AYMR315W-A 108 nt-1.74□□□□□ -2.69
VMA5P31412 YGL007C-AYGL007C-A 87 nt-1.75□□□□□ -2.69
VMA5P31412 snR47snR47 99 nt-1.77□□□□□ -2.69
VMA5P31412 tY(GUA)QtY(GUA)Q 84 nt-1.78□□□□□ -2.69
VMA5P31412 YBL100W-CYBL100W-C 120 nt-1.79□□□□□ -2.7
VMA5P31412 tS(GCU)Q1tS(GCU)Q1 86 nt-2.01□□□□□ -2.73
VMA5P31412 YGL041C-BYGL041C-B 183 nt-2.02□□□□□ -2.73
VMA5P31412 YKL225WYKL225W 348 nt-2.04□□□□□ -2.74
VMA5P31412 snR61snR61 90 nt-2.06□□□□□ -2.74
VMA5P31412 YNL103W-AYNL103W-A 90 nt-2.06□□□□□ -2.74
VMA5P31412 YLR294CYLR294C 330 nt-2.08□□□□□ -2.74
VMA5P31412 YOR225WYOR225W 330 nt-2.08□□□□□ -2.74
VMA5P31412 YOR309CYOR309C 381 nt-2.11□□□□□ -2.75
VMA5P31412 snR6snR6 112 nt-2.21□□□□□ -2.76
VMA5P31412 YDR034C-AYDR034C-A 177 nt-2.22□□□□□ -2.76
VMA5P31412 YNL170WYNL170W 396 nt-2.23□□□□□ -2.77
VMA5P31412 snR62snR62 100 nt-2.25□□□□□ -2.77
VMA5P31412 tV(UAC)QtV(UAC)Q 76 nt-2.27□□□□□ -2.77
VMA5P31412 YDL114W-AYDL114W-A 114 nt-2.28□□□□□ -2.77
Retrieved 100 of 7,029 protein–RNA pairs in 7.4 ms