Protein–RNA interactions for Protein: P25303

SCJ1, DnaJ-related protein SCJ1, yeastyeast

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCJ1P25303 LAA1YJL207C 6045 nt1.72□□□□□ -2.13
SCJ1P25303 tT(UGU)HtT(UGU)H 72 nt1.72□□□□□ -2.13
SCJ1P25303 YLL006W-AYLL006W-A 177 nt1.72□□□□□ -2.13
SCJ1P25303 SPT7YBR081C 3999 nt1.71□□□□□ -2.14
SCJ1P25303 BUL2YML111W 2763 nt1.71□□□□□ -2.14
SCJ1P25303 YML054C-AYML054C-A 159 nt1.7□□□□□ -2.14
SCJ1P25303 NIP1YMR309C 2439 nt1.67□□□□□ -2.14
SCJ1P25303 FYV8YGR196C 2454 nt1.66□□□□□ -2.14
SCJ1P25303 YKL096C-BYKL096C-B 150 nt1.66□□□□□ -2.14
SCJ1P25303 YGR130CYGR130C 2451 nt1.65□□□□□ -2.14
SCJ1P25303 PAU12YGR294W 363 nt1.65□□□□□ -2.15
SCJ1P25303 YPR117WYPR117W 7470 nt1.62□□□□□ -2.15
SCJ1P25303 LTE1YAL024C 4308 nt1.6□□□□□ -2.15
SCJ1P25303 tQ(UUG)E2tQ(UUG)E2 72 nt1.6□□□□□ -2.15
SCJ1P25303 SKI7YOR076C 2244 nt1.58□□□□□ -2.16
SCJ1P25303 tQ(UUG)QtQ(UUG)Q 76 nt1.58□□□□□ -2.16
SCJ1P25303 YLR149C-AYLR149C-A 87 nt1.58□□□□□ -2.16
SCJ1P25303 snR38snR38 95 nt1.54□□□□□ -2.16
SCJ1P25303 AI1Q0050 2505 nt1.52□□□□□ -2.17
SCJ1P25303 HKR1YDR420W 5409 nt1.49□□□□□ -2.17
SCJ1P25303 BUD3YCL014W 4911 nt1.48□□□□□ -2.17
SCJ1P25303 YER090C-AYER090C-A 90 nt1.47□□□□□ -2.17
SCJ1P25303 YNL054W-BYNL054W-B 5250 nt1.45□□□□□ -2.18
SCJ1P25303 IML1YJR138W 4755 nt1.44□□□□□ -2.18
SCJ1P25303 snR75snR75 89 nt1.43□□□□□ -2.18
SCJ1P25303 YGR122C-AYGR122C-A 129 nt1.43□□□□□ -2.18
SCJ1P25303 YDL159W-AYDL159W-A 132 nt1.42□□□□□ -2.18
SCJ1P25303 SCC2YDR180W 4482 nt1.41□□□□□ -2.18
SCJ1P25303 SPC110YDR356W 2835 nt1.39□□□□□ -2.19
SCJ1P25303 YER078W-AYER078W-A 165 nt1.39□□□□□ -2.19
SCJ1P25303 DOP1YDR141C 5097 nt1.36□□□□□ -2.19
SCJ1P25303 YJR029WYJR029W 5268 nt1.32□□□□□ -2.2
SCJ1P25303 snR67snR67 82 nt1.32□□□□□ -2.2
SCJ1P25303 tH(GUG)E1tH(GUG)E1 72 nt1.31□□□□□ -2.2
SCJ1P25303 tH(GUG)E2tH(GUG)E2 72 nt1.31□□□□□ -2.2
SCJ1P25303 tH(GUG)G1tH(GUG)G1 72 nt1.31□□□□□ -2.2
SCJ1P25303 tH(GUG)G2tH(GUG)G2 72 nt1.31□□□□□ -2.2
SCJ1P25303 tH(GUG)HtH(GUG)H 72 nt1.31□□□□□ -2.2
SCJ1P25303 tH(GUG)KtH(GUG)K 72 nt1.31□□□□□ -2.2
SCJ1P25303 tH(GUG)MtH(GUG)M 72 nt1.31□□□□□ -2.2
SCJ1P25303 MLP1YKR095W 5628 nt1.29□□□□□ -2.2
SCJ1P25303 IQG1YPL242C 4488 nt1.29□□□□□ -2.2
SCJ1P25303 VAM6YDL077C 3150 nt1.29□□□□□ -2.2
SCJ1P25303 BEM2YER155C 6504 nt1.28□□□□□ -2.2
SCJ1P25303 PAU24YBR301W 363 nt1.28□□□□□ -2.2
SCJ1P25303 PET111YMR257C 2403 nt1.28□□□□□ -2.2
SCJ1P25303 YPR137C-BYPR137C-B 5268 nt1.25□□□□□ -2.21
SCJ1P25303 MYO1YHR023W 5787 nt1.23□□□□□ -2.21
SCJ1P25303 YOR192C-BYOR192C-B 5313 nt1.22□□□□□ -2.21
SCJ1P25303 tV(UAC)BtV(UAC)B 74 nt1.2□□□□□ -2.22
SCJ1P25303 tV(UAC)DtV(UAC)D 74 nt1.2□□□□□ -2.22
SCJ1P25303 RKR1YMR247C 4689 nt1.19□□□□□ -2.22
SCJ1P25303 YBL100W-BYBL100W-B 5313 nt1.11□□□□□ -2.23
SCJ1P25303 YKL106C-AYKL106C-A 120 nt1.05□□□□□ -2.24
SCJ1P25303 YMR160WYMR160W 2451 nt1.03□□□□□ -2.24
SCJ1P25303 YOR186C-AYOR186C-A 210 nt1.03□□□□□ -2.24
SCJ1P25303 UTP20YBL004W 7482 nt1.01□□□□□ -2.25
SCJ1P25303 tF(GAA)BtF(GAA)B 73 nt0.99□□□□□ -2.25
SCJ1P25303 tF(GAA)FtF(GAA)F 73 nt0.99□□□□□ -2.25
SCJ1P25303 tF(GAA)GtF(GAA)G 73 nt0.99□□□□□ -2.25
SCJ1P25303 tF(GAA)H1tF(GAA)H1 73 nt0.99□□□□□ -2.25
SCJ1P25303 tF(GAA)H2tF(GAA)H2 73 nt0.99□□□□□ -2.25
SCJ1P25303 tF(GAA)MtF(GAA)M 73 nt0.99□□□□□ -2.25
SCJ1P25303 tF(GAA)P1tF(GAA)P1 73 nt0.99□□□□□ -2.25
SCJ1P25303 tF(GAA)P2tF(GAA)P2 73 nt0.99□□□□□ -2.25
SCJ1P25303 YDL114W-AYDL114W-A 114 nt0.96□□□□□ -2.26
SCJ1P25303 EMT1tM(CAU)D 73 nt0.92□□□□□ -2.26
SCJ1P25303 EMT5tM(CAU)J1 73 nt0.92□□□□□ -2.26
SCJ1P25303 EMT3tM(CAU)J2 73 nt0.92□□□□□ -2.26
SCJ1P25303 EMT4tM(CAU)M 73 nt0.92□□□□□ -2.26
SCJ1P25303 EMT2tM(CAU)O2 73 nt0.92□□□□□ -2.26
SCJ1P25303 YOL014WYOL014W 375 nt0.92□□□□□ -2.26
SCJ1P25303 YML100W-AYML100W-A 174 nt0.85□□□□□ -2.27
SCJ1P25303 YPR159C-AYPR159C-A 102 nt0.85□□□□□ -2.27
SCJ1P25303 tT(AGU)BtT(AGU)B 73 nt0.84□□□□□ -2.27
SCJ1P25303 tT(AGU)CtT(AGU)C 73 nt0.84□□□□□ -2.27
SCJ1P25303 tT(AGU)DtT(AGU)D 73 nt0.84□□□□□ -2.27
SCJ1P25303 tT(AGU)HtT(AGU)H 73 nt0.84□□□□□ -2.27
SCJ1P25303 tT(AGU)I1tT(AGU)I1 73 nt0.84□□□□□ -2.27
SCJ1P25303 tT(AGU)I2tT(AGU)I2 73 nt0.84□□□□□ -2.27
SCJ1P25303 tT(AGU)JtT(AGU)J 73 nt0.84□□□□□ -2.27
SCJ1P25303 tT(AGU)N1tT(AGU)N1 73 nt0.84□□□□□ -2.27
SCJ1P25303 tT(AGU)N2tT(AGU)N2 73 nt0.84□□□□□ -2.27
SCJ1P25303 tT(AGU)O1tT(AGU)O1 73 nt0.84□□□□□ -2.27
SCJ1P25303 tT(AGU)O2tT(AGU)O2 73 nt0.84□□□□□ -2.27
SCJ1P25303 ESP1YGR098C 4893 nt0.83□□□□□ -2.28
SCJ1P25303 tV(UAC)QtV(UAC)Q 76 nt0.82□□□□□ -2.28
SCJ1P25303 FMP27YLR454W 7887 nt0.81□□□□□ -2.28
SCJ1P25303 YKL145W-AYKL145W-A 93 nt0.75□□□□□ -2.29
SCJ1P25303 THO2YNL139C 4794 nt0.7□□□□□ -2.3
SCJ1P25303 YOR316C-AYOR316C-A 210 nt0.69□□□□□ -2.3
SCJ1P25303 YOR376W-AYOR376W-A 156 nt0.66□□□□□ -2.3
SCJ1P25303 UTP10YJL109C 5310 nt0.65□□□□□ -2.31
SCJ1P25303 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
SCJ1P25303 SOV1YMR066W 2697 nt0.63□□□□□ -2.31
SCJ1P25303 SBH2YER019C-A 267 nt0.61□□□□□ -2.31
SCJ1P25303 snR77snR77 88 nt0.57□□□□□ -2.32
SCJ1P25303 YJL113WYJL113W 4647 nt0.54□□□□□ -2.32
SCJ1P25303 snR128snR128 126 nt0.53□□□□□ -2.32
SCJ1P25303 YOL013W-AYOL013W-A 192 nt0.48□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 54.7 ms