Protein–RNA interactions for Protein: P10622

RPP1B, 60S acidic ribosomal protein P1-beta, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPP1BP10622 NEO1YIL048W 3456 nt1.88□□□□□ -2.11
RPP1BP10622 BST1YFL025C 3090 nt1.88□□□□□ -2.11
RPP1BP10622 VPS15YBR097W 4365 nt1.87□□□□□ -2.11
RPP1BP10622 YLL006W-AYLL006W-A 177 nt1.87□□□□□ -2.11
RPP1BP10622 TMA7YLR262C-A 195 nt1.87□□□□□ -2.11
RPP1BP10622 SSK2YNR031C 4740 nt1.84□□□□□ -2.11
RPP1BP10622 tQ(UUG)QtQ(UUG)Q 76 nt1.8□□□□□ -2.12
RPP1BP10622 YGR130CYGR130C 2451 nt1.77□□□□□ -2.13
RPP1BP10622 YER090C-AYER090C-A 90 nt1.77□□□□□ -2.13
RPP1BP10622 CCH1YGR217W 6120 nt1.74□□□□□ -2.13
RPP1BP10622 CLU1YMR012W 3834 nt1.73□□□□□ -2.13
RPP1BP10622 YOR093CYOR093C 4947 nt1.73□□□□□ -2.13
RPP1BP10622 SPT7YBR081C 3999 nt1.73□□□□□ -2.13
RPP1BP10622 FYV8YGR196C 2454 nt1.73□□□□□ -2.13
RPP1BP10622 FIG2YCR089W 4830 nt1.72□□□□□ -2.13
RPP1BP10622 DNF3YMR162C 4971 nt1.72□□□□□ -2.13
RPP1BP10622 YMR272W-BYMR272W-B 108 nt1.71□□□□□ -2.14
RPP1BP10622 YNL284C-BYNL284C-B 5268 nt1.71□□□□□ -2.14
RPP1BP10622 BUD3YCL014W 4911 nt1.69□□□□□ -2.14
RPP1BP10622 YMR247W-AYMR247W-A 144 nt1.68□□□□□ -2.14
RPP1BP10622 MEC1YBR136W 7107 nt1.65□□□□□ -2.15
RPP1BP10622 tT(UGU)HtT(UGU)H 72 nt1.61□□□□□ -2.15
RPP1BP10622 RKR1YMR247C 4689 nt1.58□□□□□ -2.16
RPP1BP10622 HKR1YDR420W 5409 nt1.58□□□□□ -2.16
RPP1BP10622 VAM6YDL077C 3150 nt1.57□□□□□ -2.16
RPP1BP10622 CAT8YMR280C 4302 nt1.57□□□□□ -2.16
RPP1BP10622 IRA1YBR140C 9279 nt1.57□□□□□ -2.16
RPP1BP10622 YOR192C-BYOR192C-B 5313 nt1.57□□□□□ -2.16
RPP1BP10622 YPR117WYPR117W 7470 nt1.55□□□□□ -2.16
RPP1BP10622 snR67snR67 82 nt1.54□□□□□ -2.16
RPP1BP10622 tV(UAC)QtV(UAC)Q 76 nt1.53□□□□□ -2.16
RPP1BP10622 YOR376W-AYOR376W-A 156 nt1.51□□□□□ -2.17
RPP1BP10622 YDL114W-AYDL114W-A 114 nt1.5□□□□□ -2.17
RPP1BP10622 BRR2YER172C 6492 nt1.44□□□□□ -2.18
RPP1BP10622 YMR160WYMR160W 2451 nt1.42□□□□□ -2.18
RPP1BP10622 YKL106C-AYKL106C-A 120 nt1.41□□□□□ -2.18
RPP1BP10622 YBL100W-BYBL100W-B 5313 nt1.38□□□□□ -2.19
RPP1BP10622 tQ(UUG)E2tQ(UUG)E2 72 nt1.36□□□□□ -2.19
RPP1BP10622 YJR029WYJR029W 5268 nt1.32□□□□□ -2.2
RPP1BP10622 YPR137C-BYPR137C-B 5268 nt1.32□□□□□ -2.2
RPP1BP10622 PAU24YBR301W 363 nt1.3□□□□□ -2.2
RPP1BP10622 SCC2YDR180W 4482 nt1.28□□□□□ -2.2
RPP1BP10622 snR40snR40 97 nt1.23□□□□□ -2.21
RPP1BP10622 DOP1YDR141C 5097 nt1.22□□□□□ -2.21
RPP1BP10622 tH(GUG)E1tH(GUG)E1 72 nt1.22□□□□□ -2.21
RPP1BP10622 tH(GUG)E2tH(GUG)E2 72 nt1.22□□□□□ -2.21
RPP1BP10622 tH(GUG)G1tH(GUG)G1 72 nt1.22□□□□□ -2.21
RPP1BP10622 tH(GUG)G2tH(GUG)G2 72 nt1.22□□□□□ -2.21
RPP1BP10622 tH(GUG)HtH(GUG)H 72 nt1.22□□□□□ -2.21
RPP1BP10622 tH(GUG)KtH(GUG)K 72 nt1.22□□□□□ -2.21
RPP1BP10622 tH(GUG)MtH(GUG)M 72 nt1.22□□□□□ -2.21
RPP1BP10622 MLP2YIL149C 5040 nt1.21□□□□□ -2.22
RPP1BP10622 LTE1YAL024C 4308 nt1.2□□□□□ -2.22
RPP1BP10622 YML100W-AYML100W-A 174 nt1.1□□□□□ -2.23
RPP1BP10622 tV(UAC)BtV(UAC)B 74 nt1.08□□□□□ -2.24
RPP1BP10622 tV(UAC)DtV(UAC)D 74 nt1.08□□□□□ -2.24
RPP1BP10622 IML1YJR138W 4755 nt1.07□□□□□ -2.24
RPP1BP10622 EMT1tM(CAU)D 73 nt1.07□□□□□ -2.24
RPP1BP10622 EMT5tM(CAU)J1 73 nt1.07□□□□□ -2.24
RPP1BP10622 EMT3tM(CAU)J2 73 nt1.07□□□□□ -2.24
RPP1BP10622 EMT4tM(CAU)M 73 nt1.07□□□□□ -2.24
RPP1BP10622 EMT2tM(CAU)O2 73 nt1.07□□□□□ -2.24
RPP1BP10622 YOR316C-AYOR316C-A 210 nt1.06□□□□□ -2.24
RPP1BP10622 snR77snR77 88 nt1.05□□□□□ -2.24
RPP1BP10622 SOV1YMR066W 2697 nt1.02□□□□□ -2.25
RPP1BP10622 BEM2YER155C 6504 nt0.95□□□□□ -2.26
RPP1BP10622 MLP1YKR095W 5628 nt0.95□□□□□ -2.26
RPP1BP10622 IQG1YPL242C 4488 nt0.93□□□□□ -2.26
RPP1BP10622 SBH2YER019C-A 267 nt0.91□□□□□ -2.26
RPP1BP10622 THO2YNL139C 4794 nt0.9□□□□□ -2.27
RPP1BP10622 YOR186C-AYOR186C-A 210 nt0.87□□□□□ -2.27
RPP1BP10622 ESP1YGR098C 4893 nt0.85□□□□□ -2.27
RPP1BP10622 UTP10YJL109C 5310 nt0.72□□□□□ -2.29
RPP1BP10622 FMP27YLR454W 7887 nt0.68□□□□□ -2.3
RPP1BP10622 YPR159C-AYPR159C-A 102 nt0.68□□□□□ -2.3
RPP1BP10622 YJL113WYJL113W 4647 nt0.64□□□□□ -2.31
RPP1BP10622 tT(AGU)BtT(AGU)B 73 nt0.63□□□□□ -2.31
RPP1BP10622 tT(AGU)CtT(AGU)C 73 nt0.63□□□□□ -2.31
RPP1BP10622 tT(AGU)DtT(AGU)D 73 nt0.63□□□□□ -2.31
RPP1BP10622 tT(AGU)HtT(AGU)H 73 nt0.63□□□□□ -2.31
RPP1BP10622 tT(AGU)I1tT(AGU)I1 73 nt0.63□□□□□ -2.31
RPP1BP10622 tT(AGU)I2tT(AGU)I2 73 nt0.63□□□□□ -2.31
RPP1BP10622 tT(AGU)JtT(AGU)J 73 nt0.63□□□□□ -2.31
RPP1BP10622 tT(AGU)N1tT(AGU)N1 73 nt0.63□□□□□ -2.31
RPP1BP10622 tT(AGU)N2tT(AGU)N2 73 nt0.63□□□□□ -2.31
RPP1BP10622 tT(AGU)O1tT(AGU)O1 73 nt0.63□□□□□ -2.31
RPP1BP10622 tT(AGU)O2tT(AGU)O2 73 nt0.63□□□□□ -2.31
RPP1BP10622 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
RPP1BP10622 PAU9YBL108C-A 129 nt0.58□□□□□ -2.32
RPP1BP10622 snR128snR128 126 nt0.54□□□□□ -2.32
RPP1BP10622 UTP20YBL004W 7482 nt0.52□□□□□ -2.33
RPP1BP10622 YOL013W-AYOL013W-A 192 nt0.45□□□□□ -2.34
RPP1BP10622 tA(UGC)QtA(UGC)Q 76 nt0.44□□□□□ -2.34
RPP1BP10622 snR6snR6 112 nt0.36□□□□□ -2.35
RPP1BP10622 YOR335W-AYOR335W-A 81 nt0.34□□□□□ -2.36
RPP1BP10622 snR161snR161 161 nt0.32□□□□□ -2.36
RPP1BP10622 YKL145W-AYKL145W-A 93 nt0.27□□□□□ -2.37
RPP1BP10622 tF(GAA)BtF(GAA)B 73 nt0.23□□□□□ -2.37
RPP1BP10622 tF(GAA)FtF(GAA)F 73 nt0.23□□□□□ -2.37
RPP1BP10622 tF(GAA)GtF(GAA)G 73 nt0.23□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms