Protein–RNA interactions for Protein: P0CX40

RPS8B, 40S ribosomal protein S8-B, yeastyeast

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS8BP0CX40 tL(UAA)QtL(UAA)Q 85 nt0.5□□□□□ -2.33
RPS8BP0CX40 MLP1YKR095W 5628 nt0.5□□□□□ -2.33
RPS8BP0CX40 YDL007C-AYDL007C-A 258 nt0.49□□□□□ -2.33
RPS8BP0CX40 YDR210WYDR210W 228 nt0.49□□□□□ -2.33
RPS8BP0CX40 YBL053WYBL053W 375 nt0.49□□□□□ -2.33
RPS8BP0CX40 snR39BsnR39B 96 nt0.49□□□□□ -2.33
RPS8BP0CX40 NIP1YMR309C 2439 nt0.48□□□□□ -2.33
RPS8BP0CX40 RPS26AYGL189C 360 nt0.48□□□□□ -2.33
RPS8BP0CX40 YDR371C-AYDR371C-A 105 nt0.47□□□□□ -2.33
RPS8BP0CX40 RPM2YML091C 3609 nt0.46□□□□□ -2.34
RPS8BP0CX40 SBH1YER087C-B 249 nt0.46□□□□□ -2.34
RPS8BP0CX40 YNL067W-BYNL067W-B 141 nt0.46□□□□□ -2.34
RPS8BP0CX40 YER078W-AYER078W-A 165 nt0.45□□□□□ -2.34
RPS8BP0CX40 YGR146C-AYGR146C-A 162 nt0.42□□□□□ -2.34
RPS8BP0CX40 ORC3YLL004W 1851 nt0.41□□□□□ -2.34
RPS8BP0CX40 RCO1YMR075W 2055 nt0.37□□□□□ -2.35
RPS8BP0CX40 YGR164WYGR164W 336 nt0.35□□□□□ -2.35
RPS8BP0CX40 YOR186C-AYOR186C-A 210 nt0.34□□□□□ -2.36
RPS8BP0CX40 SOM1YEL059C-A 225 nt0.33□□□□□ -2.36
RPS8BP0CX40 YNL205CYNL205C 423 nt0.33□□□□□ -2.36
RPS8BP0CX40 YBR099CYBR099C 384 nt0.32□□□□□ -2.36
RPS8BP0CX40 MYO1YHR023W 5787 nt0.31□□□□□ -2.36
RPS8BP0CX40 YCR095W-AYCR095W-A 159 nt0.3□□□□□ -2.36
RPS8BP0CX40 YJL077W-AYJL077W-A 87 nt0.28□□□□□ -2.36
RPS8BP0CX40 YCL001W-BYCL001W-B 255 nt0.27□□□□□ -2.37
RPS8BP0CX40 MLP2YIL149C 5040 nt0.27□□□□□ -2.37
RPS8BP0CX40 PMP2YEL017C-A 132 nt0.26□□□□□ -2.37
RPS8BP0CX40 EST1YLR233C 2100 nt0.25□□□□□ -2.37
RPS8BP0CX40 snR69snR69 101 nt0.25□□□□□ -2.37
RPS8BP0CX40 YNL170WYNL170W 396 nt0.24□□□□□ -2.37
RPS8BP0CX40 ATP8Q0080 147 nt0.22□□□□□ -2.37
RPS8BP0CX40 SEC10YLR166C 2616 nt0.22□□□□□ -2.37
RPS8BP0CX40 tQ(UUG)QtQ(UUG)Q 76 nt0.21□□□□□ -2.38
RPS8BP0CX40 YNL266WYNL266W 420 nt0.21□□□□□ -2.38
RPS8BP0CX40 YOL013W-AYOL013W-A 192 nt0.21□□□□□ -2.38
RPS8BP0CX40 YIL071W-AYIL071W-A 477 nt0.2□□□□□ -2.38
RPS8BP0CX40 RDS3YPR094W 324 nt0.2□□□□□ -2.38
RPS8BP0CX40 tD(GUC)QtD(GUC)Q 75 nt0.17□□□□□ -2.38
RPS8BP0CX40 Q0092Q0092 141 nt0.17□□□□□ -2.38
RPS8BP0CX40 YBR178WYBR178W 375 nt0.16□□□□□ -2.38
RPS8BP0CX40 YBR196C-AYBR196C-A 150 nt0.16□□□□□ -2.38
RPS8BP0CX40 YNL054W-BYNL054W-B 5250 nt0.15□□□□□ -2.39
RPS8BP0CX40 ESP1YGR098C 4893 nt0.14□□□□□ -2.39
RPS8BP0CX40 snR45snR45 172 nt0.13□□□□□ -2.39
RPS8BP0CX40 YLR286W-AYLR286W-A 135 nt0.1□□□□□ -2.39
RPS8BP0CX40 snR128snR128 126 nt0.1□□□□□ -2.39
RPS8BP0CX40 YPL060C-AYPL060C-A 3315 nt0.1□□□□□ -2.39
RPS8BP0CX40 SOV1YMR066W 2697 nt0.1□□□□□ -2.39
RPS8BP0CX40 YDL159C-BYDL159C-B 177 nt0.08□□□□□ -2.4
RPS8BP0CX40 YER090C-AYER090C-A 90 nt0.05□□□□□ -2.4
RPS8BP0CX40 YLR299C-AYLR299C-A 93 nt0.04□□□□□ -2.4
RPS8BP0CX40 TFB5YDR079C-A 219 nt0.03□□□□□ -2.4
RPS8BP0CX40 snR50snR50 90 nt0.03□□□□□ -2.4
RPS8BP0CX40 YML100W-AYML100W-A 174 nt-0.06□□□□□ -2.42
RPS8BP0CX40 snR67snR67 82 nt-0.07□□□□□ -2.42
RPS8BP0CX40 YOL083C-AYOL083C-A 141 nt-0.07□□□□□ -2.42
RPS8BP0CX40 YNL103W-AYNL103W-A 90 nt-0.09□□□□□ -2.42
RPS8BP0CX40 YAL037C-AYAL037C-A 93 nt-0.1□□□□□ -2.43
RPS8BP0CX40 snR61snR61 90 nt-0.11□□□□□ -2.43
RPS8BP0CX40 YGL041C-BYGL041C-B 183 nt-0.14□□□□□ -2.43
RPS8BP0CX40 YHR180C-BYHR180C-B 105 nt-0.14□□□□□ -2.43
RPS8BP0CX40 YML054C-AYML054C-A 159 nt-0.14□□□□□ -2.43
RPS8BP0CX40 PAU9YBL108C-A 129 nt-0.14□□□□□ -2.43
RPS8BP0CX40 snR81snR81 201 nt-0.15□□□□□ -2.43
RPS8BP0CX40 SBH2YER019C-A 267 nt-0.15□□□□□ -2.43
RPS8BP0CX40 YBL071C-BYBL071C-B 99 nt-0.15□□□□□ -2.43
RPS8BP0CX40 Q0143Q0143 153 nt-0.16□□□□□ -2.44
RPS8BP0CX40 YBL100W-CYBL100W-C 120 nt-0.18□□□□□ -2.44
RPS8BP0CX40 YOL164W-AYOL164W-A 183 nt-0.21□□□□□ -2.44
RPS8BP0CX40 snR85snR85 171 nt-0.25□□□□□ -2.45
RPS8BP0CX40 YNR077CYNR077C 255 nt-0.25□□□□□ -2.45
RPS8BP0CX40 tA(UGC)QtA(UGC)Q 76 nt-0.26□□□□□ -2.45
RPS8BP0CX40 YGR240C-AYGR240C-A 201 nt-0.29□□□□□ -2.46
RPS8BP0CX40 snR47snR47 99 nt-0.29□□□□□ -2.46
RPS8BP0CX40 SKI7YOR076C 2244 nt-0.29□□□□□ -2.46
RPS8BP0CX40 RPL41AYDL184C 78 nt-0.3□□□□□ -2.46
RPS8BP0CX40 YBR296C-AYBR296C-A 120 nt-0.32□□□□□ -2.46
RPS8BP0CX40 YMR326CYMR326C 309 nt-0.33□□□□□ -2.46
RPS8BP0CX40 YBR109W-AYBR109W-A 225 nt-0.34□□□□□ -2.46
RPS8BP0CX40 YHR217CYHR217C 462 nt-0.41□□□□□ -2.48
RPS8BP0CX40 tS(GCU)Q1tS(GCU)Q1 86 nt-0.42□□□□□ -2.48
RPS8BP0CX40 snR62snR62 100 nt-0.43□□□□□ -2.48
RPS8BP0CX40 YDR034C-AYDR034C-A 177 nt-0.45□□□□□ -2.48
RPS8BP0CX40 snR38snR38 95 nt-0.47□□□□□ -2.48
RPS8BP0CX40 YBL109WYBL109W 336 nt-0.49□□□□□ -2.49
RPS8BP0CX40 snR161snR161 161 nt-0.49□□□□□ -2.49
RPS8BP0CX40 YKL106C-AYKL106C-A 120 nt-0.5□□□□□ -2.49
RPS8BP0CX40 YKL225WYKL225W 348 nt-0.52□□□□□ -2.49
RPS8BP0CX40 URB1YKL014C 5295 nt-0.52□□□□□ -2.49
RPS8BP0CX40 tT(UGU)G1tT(UGU)G1 72 nt-0.54□□□□□ -2.5
RPS8BP0CX40 tT(UGU)G2tT(UGU)G2 72 nt-0.54□□□□□ -2.5
RPS8BP0CX40 tT(UGU)PtT(UGU)P 72 nt-0.54□□□□□ -2.5
RPS8BP0CX40 YDR524C-AYDR524C-A 120 nt-0.55□□□□□ -2.5
RPS8BP0CX40 YOR376W-AYOR376W-A 156 nt-0.56□□□□□ -2.5
RPS8BP0CX40 YHL009W-BYHL009W-B 5409 nt-0.63□□□□□ -2.51
RPS8BP0CX40 YLL066W-BYLL066W-B 171 nt-0.65□□□□□ -2.51
RPS8BP0CX40 YOR316C-AYOR316C-A 210 nt-0.65□□□□□ -2.51
RPS8BP0CX40 YDL247W-AYDL247W-A 75 nt-0.67□□□□□ -2.52
RPS8BP0CX40 snR33snR33 183 nt-0.67□□□□□ -2.52
RPS8BP0CX40 YJL113WYJL113W 4647 nt-0.69□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms