Protein–RNA interactions for Protein: O13549

VPS63, Uncharacterized protein VPS63, yeast

Predictions only

Length 108 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS63	O13549	tM(CAU)Q2	tM(CAU)Q2	78 nt		-0.08	□□□□□ -2.42
VPS63	O13549	YLR342W-A	YLR342W-A	174 nt		-0.08	□□□□□ -2.42
VPS63	O13549	YOR329W-A	YOR329W-A	210 nt		-0.08	□□□□□ -2.42
VPS63	O13549	snR39B	snR39B	96 nt		-0.1	□□□□□ -2.43
VPS63	O13549	YDR406W-A	YDR406W-A	246 nt		-0.13	□□□□□ -2.43
VPS63	O13549	snR45	snR45	172 nt		-0.14	□□□□□ -2.43
VPS63	O13549	snR48	snR48	113 nt		-0.14	□□□□□ -2.43
VPS63	O13549	YGR146C-A	YGR146C-A	162 nt		-0.15	□□□□□ -2.43
VPS63	O13549	YGR164W	YGR164W	336 nt		-0.15	□□□□□ -2.43
VPS63	O13549	tL(UAA)Q	tL(UAA)Q	85 nt		-0.17	□□□□□ -2.44
VPS63	O13549	YJL077W-A	YJL077W-A	87 nt		-0.19	□□□□□ -2.44
VPS63	O13549	YJL150W	YJL150W	303 nt		-0.19	□□□□□ -2.44
VPS63	O13549	snR69	snR69	101 nt		-0.2	□□□□□ -2.44
VPS63	O13549	YMR046W-A	YMR046W-A	129 nt		-0.21	□□□□□ -2.44
VPS63	O13549	SPG3	YDR504C	384 nt		-0.22	□□□□□ -2.44
VPS63	O13549	JLP2	YMR132C	627 nt		-0.22	□□□□□ -2.44
VPS63	O13549	YHL015W-A	YHL015W-A	84 nt		-0.23	□□□□□ -2.45
VPS63	O13549	YDL007C-A	YDL007C-A	258 nt		-0.24	□□□□□ -2.45
VPS63	O13549	PMP2	YEL017C-A	132 nt		-0.24	□□□□□ -2.45
VPS63	O13549	tQ(UUG)Q	tQ(UUG)Q	76 nt		-0.24	□□□□□ -2.45
VPS63	O13549	YOR102W	YOR102W	351 nt		-0.24	□□□□□ -2.45
VPS63	O13549	YNL067W-B	YNL067W-B	141 nt		-0.26	□□□□□ -2.45
VPS63	O13549	YNL198C	YNL198C	303 nt		-0.28	□□□□□ -2.45
VPS63	O13549	SBH2	YER019C-A	267 nt		-0.29	□□□□□ -2.46
VPS63	O13549	YML100W-A	YML100W-A	174 nt		-0.29	□□□□□ -2.46
VPS63	O13549	RDS3	YPR094W	324 nt		-0.3	□□□□□ -2.46
VPS63	O13549	YBL053W	YBL053W	375 nt		-0.32	□□□□□ -2.46
VPS63	O13549	YNL205C	YNL205C	423 nt		-0.32	□□□□□ -2.46
VPS63	O13549	tM(CAU)Q1	tM(CAU)Q1	76 nt		-0.33	□□□□□ -2.46
VPS63	O13549	YER090C-A	YER090C-A	90 nt		-0.34	□□□□□ -2.46
VPS63	O13549	SEC10	YLR166C	2616 nt		-0.34	□□□□□ -2.46
VPS63	O13549	tD(GUC)Q	tD(GUC)Q	75 nt		-0.36	□□□□□ -2.47
VPS63	O13549	snR50	snR50	90 nt		-0.36	□□□□□ -2.47
VPS63	O13549	TFB5	YDR079C-A	219 nt		-0.38	□□□□□ -2.47
VPS63	O13549	YNL266W	YNL266W	420 nt		-0.38	□□□□□ -2.47
VPS63	O13549	YIL071W-A	YIL071W-A	477 nt		-0.39	□□□□□ -2.47
VPS63	O13549	YBR178W	YBR178W	375 nt		-0.39	□□□□□ -2.47
VPS63	O13549	YLR286W-A	YLR286W-A	135 nt		-0.43	□□□□□ -2.48
VPS63	O13549	tA(UGC)Q	tA(UGC)Q	76 nt		-0.45	□□□□□ -2.48
VPS63	O13549	PAU9	YBL108C-A	129 nt		-0.45	□□□□□ -2.48
VPS63	O13549	YLR466C-B	YLR466C-B	117 nt		-0.46	□□□□□ -2.48
VPS63	O13549	YDL159C-B	YDL159C-B	177 nt		-0.47	□□□□□ -2.48
VPS63	O13549	YGR151C	YGR151C	336 nt		-0.51	□□□□□ -2.49
VPS63	O13549	SOM1	YEL059C-A	225 nt		-0.53	□□□□□ -2.49
VPS63	O13549	YBR196C-A	YBR196C-A	150 nt		-0.54	□□□□□ -2.5
VPS63	O13549	snR67	snR67	82 nt		-0.55	□□□□□ -2.5
VPS63	O13549	YNL338W	YNL338W	159 nt		-0.57	□□□□□ -2.5
VPS63	O13549	YCR095W-A	YCR095W-A	159 nt		-0.58	□□□□□ -2.5
VPS63	O13549	YLR299C-A	YLR299C-A	93 nt		-0.58	□□□□□ -2.5
VPS63	O13549	URB1	YKL014C	5295 nt		-0.62	□□□□□ -2.51
VPS63	O13549	SKI7	YOR076C	2244 nt		-0.63	□□□□□ -2.51
VPS63	O13549	YNL337W	YNL337W	255 nt		-0.64	□□□□□ -2.51
VPS63	O13549	YJL113W	YJL113W	4647 nt		-0.66	□□□□□ -2.52
VPS63	O13549	YCL001W-B	YCL001W-B	255 nt		-0.71	□□□□□ -2.52
VPS63	O13549	YML054C-A	YML054C-A	159 nt		-0.73	□□□□□ -2.53
VPS63	O13549	Q0032	Q0032	291 nt		-0.74	□□□□□ -2.53
VPS63	O13549	YHL009W-B	YHL009W-B	5409 nt		-0.74	□□□□□ -2.53
VPS63	O13549	YGL007C-A	YGL007C-A	87 nt		-0.76	□□□□□ -2.53
VPS63	O13549	snR33	snR33	183 nt		-0.79	□□□□□ -2.54
VPS63	O13549	YHR180C-B	YHR180C-B	105 nt		-0.81	□□□□□ -2.54
VPS63	O13549	snR161	snR161	161 nt		-0.81	□□□□□ -2.54
VPS63	O13549	YOL083C-A	YOL083C-A	141 nt		-0.89	□□□□□ -2.55
VPS63	O13549	YBL071C-B	YBL071C-B	99 nt		-0.9	□□□□□ -2.55
VPS63	O13549	YOR225W	YOR225W	330 nt		-0.96	□□□□□ -2.56
VPS63	O13549	YAL037C-A	YAL037C-A	93 nt		-0.97	□□□□□ -2.56
VPS63	O13549	YBR109W-A	YBR109W-A	225 nt		-0.98	□□□□□ -2.57
VPS63	O13549	YLR294C	YLR294C	330 nt		-0.99	□□□□□ -2.57
VPS63	O13549	YOL164W-A	YOL164W-A	183 nt		-0.99	□□□□□ -2.57
VPS63	O13549	YOR376W-A	YOR376W-A	156 nt		-1	□□□□□ -2.57
VPS63	O13549	tT(UGU)G1	tT(UGU)G1	72 nt		-1.01	□□□□□ -2.57
VPS63	O13549	tT(UGU)G2	tT(UGU)G2	72 nt		-1.01	□□□□□ -2.57
VPS63	O13549	tT(UGU)P	tT(UGU)P	72 nt		-1.01	□□□□□ -2.57
VPS63	O13549	snR81	snR81	201 nt		-1.02	□□□□□ -2.57
VPS63	O13549	RPL41A	YDL184C	78 nt		-1.03	□□□□□ -2.57
VPS63	O13549	YBR296C-A	YBR296C-A	120 nt		-1.03	□□□□□ -2.57
VPS63	O13549	tP(UGG)Q	tP(UGG)Q	72 nt		-1.07	□□□□□ -2.58
VPS63	O13549	snR38	snR38	95 nt		-1.07	□□□□□ -2.58
VPS63	O13549	snR47	snR47	99 nt		-1.09	□□□□□ -2.58
VPS63	O13549	YKL106C-A	YKL106C-A	120 nt		-1.1	□□□□□ -2.59
VPS63	O13549	snR77	snR77	88 nt		-1.14	□□□□□ -2.59
VPS63	O13549	YGR240C-A	YGR240C-A	201 nt		-1.14	□□□□□ -2.59
VPS63	O13549	YBL100W-C	YBL100W-C	120 nt		-1.14	□□□□□ -2.59
VPS63	O13549	CDC65	tQ(CUG)M	72 nt		-1.17	□□□□□ -2.6
VPS63	O13549	YNL103W-A	YNL103W-A	90 nt		-1.17	□□□□□ -2.6
VPS63	O13549	YOR316C-A	YOR316C-A	210 nt		-1.17	□□□□□ -2.6
VPS63	O13549	YNL170W	YNL170W	396 nt		-1.18	□□□□□ -2.6
VPS63	O13549	YGL041C-B	YGL041C-B	183 nt		-1.21	□□□□□ -2.6
VPS63	O13549	snR61	snR61	90 nt		-1.23	□□□□□ -2.61
VPS63	O13549	tS(GCU)Q1	tS(GCU)Q1	86 nt		-1.26	□□□□□ -2.61
VPS63	O13549	ATP8	Q0080	147 nt		-1.31	□□□□□ -2.62
VPS63	O13549	YKL225W	YKL225W	348 nt		-1.33	□□□□□ -2.62
VPS63	O13549	YBR223W-A	YBR223W-A	120 nt		-1.33	□□□□□ -2.62
VPS63	O13549	YMR315W-A	YMR315W-A	108 nt		-1.34	□□□□□ -2.62
VPS63	O13549	YDR034C-A	YDR034C-A	177 nt		-1.41	□□□□□ -2.64
VPS63	O13549	snR62	snR62	100 nt		-1.45	□□□□□ -2.64
VPS63	O13549	tY(GUA)Q	tY(GUA)Q	84 nt		-1.51	□□□□□ -2.65
VPS63	O13549	Q0092	Q0092	141 nt		-1.58	□□□□□ -2.66
VPS63	O13549	Q0143	Q0143	153 nt		-1.59	□□□□□ -2.66
VPS63	O13549	YDL114W-A	YDL114W-A	114 nt		-1.62	□□□□□ -2.67
VPS63	O13549	tV(UAC)Q	tV(UAC)Q	76 nt		-1.62	□□□□□ -2.67

Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms