Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ClcnkaQ9WUB7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ClcnkaQ9WUB7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
ClcnkaQ9WUB7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.94■■□□□ 1.1
ClcnkaQ9WUB7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ClcnkaQ9WUB7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
ClcnkaQ9WUB7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
ClcnkaQ9WUB7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
ClcnkaQ9WUB7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ClcnkaQ9WUB7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ClcnkaQ9WUB7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ClcnkaQ9WUB7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ClcnkaQ9WUB7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ClcnkaQ9WUB7 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.92■■□□□ 1.1
ClcnkaQ9WUB7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ClcnkaQ9WUB7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.91■■□□□ 1.1
ClcnkaQ9WUB7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ClcnkaQ9WUB7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ClcnkaQ9WUB7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.9■■□□□ 1.1
ClcnkaQ9WUB7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ClcnkaQ9WUB7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ClcnkaQ9WUB7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ClcnkaQ9WUB7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ClcnkaQ9WUB7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
ClcnkaQ9WUB7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.88■■□□□ 1.09
ClcnkaQ9WUB7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ClcnkaQ9WUB7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ClcnkaQ9WUB7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ClcnkaQ9WUB7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ClcnkaQ9WUB7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.86■■□□□ 1.09
ClcnkaQ9WUB7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ClcnkaQ9WUB7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ClcnkaQ9WUB7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
ClcnkaQ9WUB7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ClcnkaQ9WUB7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ClcnkaQ9WUB7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
ClcnkaQ9WUB7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ClcnkaQ9WUB7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
ClcnkaQ9WUB7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ClcnkaQ9WUB7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ClcnkaQ9WUB7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
ClcnkaQ9WUB7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ClcnkaQ9WUB7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ClcnkaQ9WUB7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.82■■□□□ 1.08
ClcnkaQ9WUB7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
ClcnkaQ9WUB7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ClcnkaQ9WUB7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ClcnkaQ9WUB7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ClcnkaQ9WUB7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.79■■□□□ 1.08
ClcnkaQ9WUB7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ClcnkaQ9WUB7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ClcnkaQ9WUB7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ClcnkaQ9WUB7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ClcnkaQ9WUB7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ClcnkaQ9WUB7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ClcnkaQ9WUB7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.77■■□□□ 1.08
ClcnkaQ9WUB7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ClcnkaQ9WUB7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ClcnkaQ9WUB7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ClcnkaQ9WUB7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ClcnkaQ9WUB7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ClcnkaQ9WUB7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ClcnkaQ9WUB7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ClcnkaQ9WUB7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ClcnkaQ9WUB7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ClcnkaQ9WUB7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ClcnkaQ9WUB7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
ClcnkaQ9WUB7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ClcnkaQ9WUB7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.7■■□□□ 1.06
ClcnkaQ9WUB7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ClcnkaQ9WUB7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ClcnkaQ9WUB7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ClcnkaQ9WUB7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ClcnkaQ9WUB7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ClcnkaQ9WUB7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ClcnkaQ9WUB7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ClcnkaQ9WUB7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ClcnkaQ9WUB7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ClcnkaQ9WUB7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ClcnkaQ9WUB7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
ClcnkaQ9WUB7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ClcnkaQ9WUB7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ClcnkaQ9WUB7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ClcnkaQ9WUB7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ClcnkaQ9WUB7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ClcnkaQ9WUB7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.66■■□□□ 1.06
ClcnkaQ9WUB7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ClcnkaQ9WUB7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ClcnkaQ9WUB7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ClcnkaQ9WUB7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.65■■□□□ 1.06
ClcnkaQ9WUB7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
ClcnkaQ9WUB7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ClcnkaQ9WUB7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ClcnkaQ9WUB7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ClcnkaQ9WUB7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.06
ClcnkaQ9WUB7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ClcnkaQ9WUB7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
ClcnkaQ9WUB7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ClcnkaQ9WUB7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.64■■□□□ 1.05
ClcnkaQ9WUB7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms