Protein–RNA interactions for Protein: Q9DCT5

Sdf2, Stromal cell-derived factor 2, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf2Q9DCT5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Sdf2Q9DCT5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sdf2Q9DCT5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sdf2Q9DCT5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sdf2Q9DCT5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.44■■□□□ 1.02
Sdf2Q9DCT5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.44■■□□□ 1.02
Sdf2Q9DCT5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sdf2Q9DCT5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sdf2Q9DCT5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sdf2Q9DCT5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sdf2Q9DCT5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sdf2Q9DCT5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Sdf2Q9DCT5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
Sdf2Q9DCT5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sdf2Q9DCT5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sdf2Q9DCT5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sdf2Q9DCT5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sdf2Q9DCT5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sdf2Q9DCT5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sdf2Q9DCT5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Sdf2Q9DCT5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
Sdf2Q9DCT5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sdf2Q9DCT5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sdf2Q9DCT5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Sdf2Q9DCT5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sdf2Q9DCT5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sdf2Q9DCT5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sdf2Q9DCT5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Sdf2Q9DCT5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sdf2Q9DCT5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sdf2Q9DCT5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sdf2Q9DCT5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sdf2Q9DCT5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Sdf2Q9DCT5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sdf2Q9DCT5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sdf2Q9DCT5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sdf2Q9DCT5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Sdf2Q9DCT5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Sdf2Q9DCT5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sdf2Q9DCT5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sdf2Q9DCT5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Sdf2Q9DCT5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sdf2Q9DCT5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sdf2Q9DCT5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sdf2Q9DCT5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sdf2Q9DCT5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.31■■□□□ 1
Sdf2Q9DCT5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sdf2Q9DCT5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.31■■□□□ 1
Sdf2Q9DCT5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sdf2Q9DCT5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sdf2Q9DCT5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.3■■□□□ 1
Sdf2Q9DCT5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sdf2Q9DCT5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.3■■□□□ 1
Sdf2Q9DCT5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Sdf2Q9DCT5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sdf2Q9DCT5 Gm30023-201ENSMUST00000197970 889 ntBASIC21.29■■□□□ 1
Sdf2Q9DCT5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sdf2Q9DCT5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sdf2Q9DCT5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sdf2Q9DCT5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sdf2Q9DCT5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sdf2Q9DCT5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sdf2Q9DCT5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.28■■□□□ 1
Sdf2Q9DCT5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sdf2Q9DCT5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sdf2Q9DCT5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sdf2Q9DCT5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Sdf2Q9DCT5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sdf2Q9DCT5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Sdf2Q9DCT5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Sdf2Q9DCT5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.26■□□□□ 0.99
Sdf2Q9DCT5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sdf2Q9DCT5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sdf2Q9DCT5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.24■□□□□ 0.99
Sdf2Q9DCT5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sdf2Q9DCT5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.24■□□□□ 0.99
Sdf2Q9DCT5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sdf2Q9DCT5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.23■□□□□ 0.99
Sdf2Q9DCT5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sdf2Q9DCT5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sdf2Q9DCT5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sdf2Q9DCT5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.22■□□□□ 0.99
Sdf2Q9DCT5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdf2Q9DCT5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdf2Q9DCT5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.22■□□□□ 0.99
Sdf2Q9DCT5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sdf2Q9DCT5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sdf2Q9DCT5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.21■□□□□ 0.99
Sdf2Q9DCT5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Sdf2Q9DCT5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Sdf2Q9DCT5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.19■□□□□ 0.98
Sdf2Q9DCT5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdf2Q9DCT5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdf2Q9DCT5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdf2Q9DCT5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sdf2Q9DCT5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdf2Q9DCT5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sdf2Q9DCT5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sdf2Q9DCT5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sdf2Q9DCT5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms