Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssbp1Q9CYR0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.46■□□□□ 0.39
Ssbp1Q9CYR0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ssbp1Q9CYR0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssbp1Q9CYR0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ssbp1Q9CYR0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssbp1Q9CYR0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssbp1Q9CYR0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ssbp1Q9CYR0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Ssbp1Q9CYR0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssbp1Q9CYR0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssbp1Q9CYR0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssbp1Q9CYR0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ssbp1Q9CYR0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssbp1Q9CYR0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssbp1Q9CYR0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ssbp1Q9CYR0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ssbp1Q9CYR0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp1Q9CYR0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp1Q9CYR0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssbp1Q9CYR0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ssbp1Q9CYR0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ssbp1Q9CYR0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssbp1Q9CYR0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp1Q9CYR0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp1Q9CYR0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ssbp1Q9CYR0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp1Q9CYR0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp1Q9CYR0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp1Q9CYR0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp1Q9CYR0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp1Q9CYR0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp1Q9CYR0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp1Q9CYR0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp1Q9CYR0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp1Q9CYR0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp1Q9CYR0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp1Q9CYR0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.39■□□□□ 0.37
Ssbp1Q9CYR0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp1Q9CYR0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.39■□□□□ 0.37
Ssbp1Q9CYR0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp1Q9CYR0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp1Q9CYR0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp1Q9CYR0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp1Q9CYR0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp1Q9CYR0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ssbp1Q9CYR0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp1Q9CYR0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp1Q9CYR0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Ssbp1Q9CYR0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp1Q9CYR0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp1Q9CYR0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.37■□□□□ 0.37
Ssbp1Q9CYR0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssbp1Q9CYR0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ssbp1Q9CYR0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.37■□□□□ 0.37
Ssbp1Q9CYR0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssbp1Q9CYR0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssbp1Q9CYR0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssbp1Q9CYR0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssbp1Q9CYR0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssbp1Q9CYR0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ssbp1Q9CYR0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssbp1Q9CYR0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.36■□□□□ 0.37
Ssbp1Q9CYR0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp1Q9CYR0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp1Q9CYR0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp1Q9CYR0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Ssbp1Q9CYR0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssbp1Q9CYR0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssbp1Q9CYR0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ssbp1Q9CYR0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssbp1Q9CYR0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssbp1Q9CYR0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ssbp1Q9CYR0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ssbp1Q9CYR0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssbp1Q9CYR0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.32■□□□□ 0.36
Ssbp1Q9CYR0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssbp1Q9CYR0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssbp1Q9CYR0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ssbp1Q9CYR0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssbp1Q9CYR0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssbp1Q9CYR0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Ssbp1Q9CYR0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ssbp1Q9CYR0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssbp1Q9CYR0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssbp1Q9CYR0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssbp1Q9CYR0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.3■□□□□ 0.36
Ssbp1Q9CYR0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssbp1Q9CYR0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ssbp1Q9CYR0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ssbp1Q9CYR0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ssbp1Q9CYR0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssbp1Q9CYR0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssbp1Q9CYR0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ssbp1Q9CYR0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ssbp1Q9CYR0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssbp1Q9CYR0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ssbp1Q9CYR0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssbp1Q9CYR0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Ssbp1Q9CYR0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms