Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nkiras2Q9CR56 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nkiras2Q9CR56 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nkiras2Q9CR56 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.25■□□□□ 0.99
Nkiras2Q9CR56 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nkiras2Q9CR56 Gm45855-201ENSMUST00000212546 880 ntBASIC21.24■□□□□ 0.99
Nkiras2Q9CR56 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkiras2Q9CR56 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkiras2Q9CR56 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkiras2Q9CR56 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkiras2Q9CR56 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkiras2Q9CR56 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkiras2Q9CR56 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nkiras2Q9CR56 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nkiras2Q9CR56 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nkiras2Q9CR56 Gm24970-201ENSMUST00000175582 82 ntBASIC21.22■□□□□ 0.99
Nkiras2Q9CR56 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.22■□□□□ 0.99
Nkiras2Q9CR56 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nkiras2Q9CR56 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Nkiras2Q9CR56 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.21■□□□□ 0.99
Nkiras2Q9CR56 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nkiras2Q9CR56 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nkiras2Q9CR56 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nkiras2Q9CR56 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nkiras2Q9CR56 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.19■□□□□ 0.98
Nkiras2Q9CR56 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nkiras2Q9CR56 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Nkiras2Q9CR56 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Nkiras2Q9CR56 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkiras2Q9CR56 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Nkiras2Q9CR56 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Nkiras2Q9CR56 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkiras2Q9CR56 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Nkiras2Q9CR56 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.17■□□□□ 0.98
Nkiras2Q9CR56 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkiras2Q9CR56 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nkiras2Q9CR56 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nkiras2Q9CR56 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nkiras2Q9CR56 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nkiras2Q9CR56 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.14■□□□□ 0.97
Nkiras2Q9CR56 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nkiras2Q9CR56 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
Nkiras2Q9CR56 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkiras2Q9CR56 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkiras2Q9CR56 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkiras2Q9CR56 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkiras2Q9CR56 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkiras2Q9CR56 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkiras2Q9CR56 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nkiras2Q9CR56 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nkiras2Q9CR56 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Nkiras2Q9CR56 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nkiras2Q9CR56 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkiras2Q9CR56 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Nkiras2Q9CR56 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkiras2Q9CR56 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Nkiras2Q9CR56 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkiras2Q9CR56 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nkiras2Q9CR56 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Nkiras2Q9CR56 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.08■□□□□ 0.97
Nkiras2Q9CR56 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nkiras2Q9CR56 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nkiras2Q9CR56 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.07■□□□□ 0.96
Nkiras2Q9CR56 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkiras2Q9CR56 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Nkiras2Q9CR56 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nkiras2Q9CR56 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.06■□□□□ 0.96
Nkiras2Q9CR56 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkiras2Q9CR56 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nkiras2Q9CR56 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.05■□□□□ 0.96
Nkiras2Q9CR56 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nkiras2Q9CR56 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Nkiras2Q9CR56 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkiras2Q9CR56 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkiras2Q9CR56 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Nkiras2Q9CR56 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkiras2Q9CR56 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkiras2Q9CR56 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nkiras2Q9CR56 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkiras2Q9CR56 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkiras2Q9CR56 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.01■□□□□ 0.95
Nkiras2Q9CR56 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Nkiras2Q9CR56 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nkiras2Q9CR56 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkiras2Q9CR56 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Nkiras2Q9CR56 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nkiras2Q9CR56 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkiras2Q9CR56 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21■□□□□ 0.95
Nkiras2Q9CR56 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Nkiras2Q9CR56 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.99■□□□□ 0.95
Nkiras2Q9CR56 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.99■□□□□ 0.95
Nkiras2Q9CR56 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Nkiras2Q9CR56 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nkiras2Q9CR56 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkiras2Q9CR56 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Nkiras2Q9CR56 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nkiras2Q9CR56 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkiras2Q9CR56 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkiras2Q9CR56 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkiras2Q9CR56 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms