Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mrpl54Q9CPW3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Mrpl54Q9CPW3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mrpl54Q9CPW3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Mrpl54Q9CPW3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Mrpl54Q9CPW3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.31■■□□□ 1
Mrpl54Q9CPW3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Mrpl54Q9CPW3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mrpl54Q9CPW3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Mrpl54Q9CPW3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mrpl54Q9CPW3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mrpl54Q9CPW3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mrpl54Q9CPW3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.3■■□□□ 1
Mrpl54Q9CPW3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mrpl54Q9CPW3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.28■■□□□ 1
Mrpl54Q9CPW3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Mrpl54Q9CPW3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mrpl54Q9CPW3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mrpl54Q9CPW3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.27■■□□□ 1
Mrpl54Q9CPW3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.27■■□□□ 1
Mrpl54Q9CPW3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Mrpl54Q9CPW3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mrpl54Q9CPW3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mrpl54Q9CPW3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mrpl54Q9CPW3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mrpl54Q9CPW3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mrpl54Q9CPW3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mrpl54Q9CPW3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mrpl54Q9CPW3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mrpl54Q9CPW3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mrpl54Q9CPW3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Mrpl54Q9CPW3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mrpl54Q9CPW3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Mrpl54Q9CPW3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Mrpl54Q9CPW3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mrpl54Q9CPW3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.21■□□□□ 0.99
Mrpl54Q9CPW3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Mrpl54Q9CPW3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mrpl54Q9CPW3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mrpl54Q9CPW3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mrpl54Q9CPW3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mrpl54Q9CPW3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mrpl54Q9CPW3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mrpl54Q9CPW3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mrpl54Q9CPW3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mrpl54Q9CPW3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Mrpl54Q9CPW3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Mrpl54Q9CPW3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mrpl54Q9CPW3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mrpl54Q9CPW3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mrpl54Q9CPW3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mrpl54Q9CPW3 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.15■□□□□ 0.98
Mrpl54Q9CPW3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.15■□□□□ 0.98
Mrpl54Q9CPW3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Mrpl54Q9CPW3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mrpl54Q9CPW3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.14■□□□□ 0.98
Mrpl54Q9CPW3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Mrpl54Q9CPW3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mrpl54Q9CPW3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Mrpl54Q9CPW3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Mrpl54Q9CPW3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mrpl54Q9CPW3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.13■□□□□ 0.97
Mrpl54Q9CPW3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Mrpl54Q9CPW3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Mrpl54Q9CPW3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Mrpl54Q9CPW3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mrpl54Q9CPW3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mrpl54Q9CPW3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mrpl54Q9CPW3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mrpl54Q9CPW3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mrpl54Q9CPW3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mrpl54Q9CPW3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mrpl54Q9CPW3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mrpl54Q9CPW3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mrpl54Q9CPW3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Mrpl54Q9CPW3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Mrpl54Q9CPW3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Mrpl54Q9CPW3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Mrpl54Q9CPW3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.08■□□□□ 0.97
Mrpl54Q9CPW3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mrpl54Q9CPW3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mrpl54Q9CPW3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mrpl54Q9CPW3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mrpl54Q9CPW3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
Mrpl54Q9CPW3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Mrpl54Q9CPW3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Mrpl54Q9CPW3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mrpl54Q9CPW3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mrpl54Q9CPW3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mrpl54Q9CPW3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Mrpl54Q9CPW3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mrpl54Q9CPW3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Mrpl54Q9CPW3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mrpl54Q9CPW3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mrpl54Q9CPW3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mrpl54Q9CPW3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Mrpl54Q9CPW3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mrpl54Q9CPW3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mrpl54Q9CPW3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Mrpl54Q9CPW3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms