Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim33Q99PP7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim33Q99PP7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim33Q99PP7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.53■■□□□ 1.36
Trim33Q99PP7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
Trim33Q99PP7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim33Q99PP7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Trim33Q99PP7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Trim33Q99PP7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim33Q99PP7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim33Q99PP7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim33Q99PP7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim33Q99PP7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Trim33Q99PP7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim33Q99PP7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Trim33Q99PP7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim33Q99PP7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Trim33Q99PP7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.48■■□□□ 1.35
Trim33Q99PP7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim33Q99PP7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim33Q99PP7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim33Q99PP7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim33Q99PP7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trim33Q99PP7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.46■■□□□ 1.35
Trim33Q99PP7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim33Q99PP7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim33Q99PP7 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.45■■□□□ 1.34
Trim33Q99PP7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim33Q99PP7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
Trim33Q99PP7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trim33Q99PP7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Trim33Q99PP7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trim33Q99PP7 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.42■■□□□ 1.34
Trim33Q99PP7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.42■■□□□ 1.34
Trim33Q99PP7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Trim33Q99PP7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim33Q99PP7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.4■■□□□ 1.34
Trim33Q99PP7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim33Q99PP7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trim33Q99PP7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.39■■□□□ 1.33
Trim33Q99PP7 Nkain2-201ENSMUST00000092602 558 ntBASIC23.39■■□□□ 1.33
Trim33Q99PP7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim33Q99PP7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
Trim33Q99PP7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.38■■□□□ 1.33
Trim33Q99PP7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim33Q99PP7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim33Q99PP7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.36■■□□□ 1.33
Trim33Q99PP7 Gm6821-201ENSMUST00000107540 542 ntBASIC23.35■■□□□ 1.33
Trim33Q99PP7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Trim33Q99PP7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Trim33Q99PP7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim33Q99PP7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.34■■□□□ 1.33
Trim33Q99PP7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
Trim33Q99PP7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.33■■□□□ 1.33
Trim33Q99PP7 Gm30023-201ENSMUST00000197970 889 ntBASIC23.33■■□□□ 1.33
Trim33Q99PP7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim33Q99PP7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Trim33Q99PP7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trim33Q99PP7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim33Q99PP7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim33Q99PP7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim33Q99PP7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim33Q99PP7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim33Q99PP7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim33Q99PP7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim33Q99PP7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Trim33Q99PP7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trim33Q99PP7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim33Q99PP7 Gm8503-201ENSMUST00000118131 455 ntBASIC23.27■■□□□ 1.32
Trim33Q99PP7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.27■■□□□ 1.32
Trim33Q99PP7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim33Q99PP7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim33Q99PP7 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.26■■□□□ 1.31
Trim33Q99PP7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim33Q99PP7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim33Q99PP7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim33Q99PP7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim33Q99PP7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim33Q99PP7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Trim33Q99PP7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim33Q99PP7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim33Q99PP7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Trim33Q99PP7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim33Q99PP7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trim33Q99PP7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trim33Q99PP7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim33Q99PP7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim33Q99PP7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.22■■□□□ 1.31
Trim33Q99PP7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim33Q99PP7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim33Q99PP7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Trim33Q99PP7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.21■■□□□ 1.31
Trim33Q99PP7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.21■■□□□ 1.31
Trim33Q99PP7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim33Q99PP7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim33Q99PP7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.2■■□□□ 1.3
Trim33Q99PP7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.2■■□□□ 1.3
Trim33Q99PP7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.2■■□□□ 1.3
Trim33Q99PP7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim33Q99PP7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms