Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb8Q91XZ2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb8Q91XZ2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb8Q91XZ2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb8Q91XZ2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.28■■□□□ 1.32
Pcdhb8Q91XZ2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb8Q91XZ2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb8Q91XZ2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Pcdhb8Q91XZ2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Pcdhb8Q91XZ2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.25■■□□□ 1.31
Pcdhb8Q91XZ2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb8Q91XZ2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb8Q91XZ2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb8Q91XZ2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb8Q91XZ2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb8Q91XZ2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Pcdhb8Q91XZ2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb8Q91XZ2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb8Q91XZ2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb8Q91XZ2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb8Q91XZ2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.22■■□□□ 1.31
Pcdhb8Q91XZ2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb8Q91XZ2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb8Q91XZ2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb8Q91XZ2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb8Q91XZ2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb8Q91XZ2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb8Q91XZ2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Pcdhb8Q91XZ2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb8Q91XZ2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb8Q91XZ2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb8Q91XZ2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.17■■□□□ 1.3
Pcdhb8Q91XZ2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.17■■□□□ 1.3
Pcdhb8Q91XZ2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb8Q91XZ2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb8Q91XZ2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb8Q91XZ2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb8Q91XZ2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Pcdhb8Q91XZ2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.15■■□□□ 1.3
Pcdhb8Q91XZ2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb8Q91XZ2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
Pcdhb8Q91XZ2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb8Q91XZ2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb8Q91XZ2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Pcdhb8Q91XZ2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb8Q91XZ2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb8Q91XZ2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb8Q91XZ2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb8Q91XZ2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.11■■□□□ 1.29
Pcdhb8Q91XZ2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb8Q91XZ2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb8Q91XZ2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Pcdhb8Q91XZ2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Pcdhb8Q91XZ2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb8Q91XZ2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhb8Q91XZ2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb8Q91XZ2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb8Q91XZ2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb8Q91XZ2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb8Q91XZ2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb8Q91XZ2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb8Q91XZ2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb8Q91XZ2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb8Q91XZ2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
Pcdhb8Q91XZ2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb8Q91XZ2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Pcdhb8Q91XZ2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.05■■□□□ 1.28
Pcdhb8Q91XZ2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb8Q91XZ2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb8Q91XZ2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Pcdhb8Q91XZ2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb8Q91XZ2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb8Q91XZ2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.04■■□□□ 1.28
Pcdhb8Q91XZ2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.04■■□□□ 1.28
Pcdhb8Q91XZ2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb8Q91XZ2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb8Q91XZ2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Pcdhb8Q91XZ2 Gm30023-201ENSMUST00000197970 889 ntBASIC23.03■■□□□ 1.28
Pcdhb8Q91XZ2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb8Q91XZ2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb8Q91XZ2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb8Q91XZ2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb8Q91XZ2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb8Q91XZ2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb8Q91XZ2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb8Q91XZ2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb8Q91XZ2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Pcdhb8Q91XZ2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb8Q91XZ2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb8Q91XZ2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb8Q91XZ2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Pcdhb8Q91XZ2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Pcdhb8Q91XZ2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Pcdhb8Q91XZ2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.99■■□□□ 1.27
Pcdhb8Q91XZ2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb8Q91XZ2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb8Q91XZ2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Pcdhb8Q91XZ2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb8Q91XZ2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Pcdhb8Q91XZ2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms