Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdt1Q8R4E9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.1■■□□□ 1.29
Cdt1Q8R4E9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdt1Q8R4E9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdt1Q8R4E9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdt1Q8R4E9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Cdt1Q8R4E9 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.09■■□□□ 1.29
Cdt1Q8R4E9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.09■■□□□ 1.29
Cdt1Q8R4E9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cdt1Q8R4E9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Cdt1Q8R4E9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cdt1Q8R4E9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Cdt1Q8R4E9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.07■■□□□ 1.28
Cdt1Q8R4E9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cdt1Q8R4E9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.05■■□□□ 1.28
Cdt1Q8R4E9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cdt1Q8R4E9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cdt1Q8R4E9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.04■■□□□ 1.28
Cdt1Q8R4E9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cdt1Q8R4E9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cdt1Q8R4E9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cdt1Q8R4E9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Cdt1Q8R4E9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cdt1Q8R4E9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdt1Q8R4E9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdt1Q8R4E9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cdt1Q8R4E9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdt1Q8R4E9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdt1Q8R4E9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdt1Q8R4E9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cdt1Q8R4E9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cdt1Q8R4E9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23■■□□□ 1.27
Cdt1Q8R4E9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cdt1Q8R4E9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
Cdt1Q8R4E9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cdt1Q8R4E9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cdt1Q8R4E9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cdt1Q8R4E9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cdt1Q8R4E9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cdt1Q8R4E9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cdt1Q8R4E9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cdt1Q8R4E9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cdt1Q8R4E9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cdt1Q8R4E9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cdt1Q8R4E9 Gm11599-201ENSMUST00000118720 878 ntBASIC22.95■■□□□ 1.26
Cdt1Q8R4E9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.95■■□□□ 1.26
Cdt1Q8R4E9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.95■■□□□ 1.26
Cdt1Q8R4E9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cdt1Q8R4E9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cdt1Q8R4E9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cdt1Q8R4E9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cdt1Q8R4E9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cdt1Q8R4E9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cdt1Q8R4E9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cdt1Q8R4E9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Cdt1Q8R4E9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cdt1Q8R4E9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Cdt1Q8R4E9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.9■■□□□ 1.26
Cdt1Q8R4E9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cdt1Q8R4E9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cdt1Q8R4E9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cdt1Q8R4E9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.89■■□□□ 1.25
Cdt1Q8R4E9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.87■■□□□ 1.25
Cdt1Q8R4E9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Cdt1Q8R4E9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.87■■□□□ 1.25
Cdt1Q8R4E9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cdt1Q8R4E9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cdt1Q8R4E9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Cdt1Q8R4E9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cdt1Q8R4E9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.85■■□□□ 1.25
Cdt1Q8R4E9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cdt1Q8R4E9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Cdt1Q8R4E9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Cdt1Q8R4E9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Cdt1Q8R4E9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cdt1Q8R4E9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cdt1Q8R4E9 Mir6538-201ENSMUST00000183713 110 ntBASIC22.83■■□□□ 1.25
Cdt1Q8R4E9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cdt1Q8R4E9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cdt1Q8R4E9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Cdt1Q8R4E9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cdt1Q8R4E9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Cdt1Q8R4E9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cdt1Q8R4E9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cdt1Q8R4E9 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.79■■□□□ 1.24
Cdt1Q8R4E9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cdt1Q8R4E9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cdt1Q8R4E9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cdt1Q8R4E9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cdt1Q8R4E9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cdt1Q8R4E9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Cdt1Q8R4E9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Cdt1Q8R4E9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cdt1Q8R4E9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdt1Q8R4E9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cdt1Q8R4E9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdt1Q8R4E9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdt1Q8R4E9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Cdt1Q8R4E9 Gm11175-201ENSMUST00000116172 543 ntBASIC22.76■■□□□ 1.23
Cdt1Q8R4E9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms