Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ubqln1Q8R317 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ubqln1Q8R317 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ubqln1Q8R317 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ubqln1Q8R317 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ubqln1Q8R317 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Ubqln1Q8R317 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ubqln1Q8R317 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.57■■□□□ 1.2
Ubqln1Q8R317 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ubqln1Q8R317 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ubqln1Q8R317 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ubqln1Q8R317 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Ubqln1Q8R317 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Ubqln1Q8R317 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.54■■□□□ 1.2
Ubqln1Q8R317 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ubqln1Q8R317 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ubqln1Q8R317 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ubqln1Q8R317 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.53■■□□□ 1.2
Ubqln1Q8R317 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ubqln1Q8R317 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Ubqln1Q8R317 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ubqln1Q8R317 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ubqln1Q8R317 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ubqln1Q8R317 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.48■■□□□ 1.19
Ubqln1Q8R317 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubqln1Q8R317 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubqln1Q8R317 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubqln1Q8R317 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubqln1Q8R317 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubqln1Q8R317 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubqln1Q8R317 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Ubqln1Q8R317 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubqln1Q8R317 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubqln1Q8R317 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ubqln1Q8R317 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ubqln1Q8R317 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.45■■□□□ 1.18
Ubqln1Q8R317 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ubqln1Q8R317 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubqln1Q8R317 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubqln1Q8R317 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubqln1Q8R317 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.43■■□□□ 1.18
Ubqln1Q8R317 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Ubqln1Q8R317 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubqln1Q8R317 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubqln1Q8R317 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubqln1Q8R317 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubqln1Q8R317 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubqln1Q8R317 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Ubqln1Q8R317 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
Ubqln1Q8R317 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubqln1Q8R317 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Ubqln1Q8R317 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
Ubqln1Q8R317 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ubqln1Q8R317 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ubqln1Q8R317 Gm30023-201ENSMUST00000197970 889 ntBASIC22.38■■□□□ 1.17
Ubqln1Q8R317 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.38■■□□□ 1.17
Ubqln1Q8R317 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ubqln1Q8R317 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.37■■□□□ 1.17
Ubqln1Q8R317 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Ubqln1Q8R317 Nkain2-201ENSMUST00000092602 558 ntBASIC22.37■■□□□ 1.17
Ubqln1Q8R317 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubqln1Q8R317 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Ubqln1Q8R317 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ubqln1Q8R317 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ubqln1Q8R317 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ubqln1Q8R317 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ubqln1Q8R317 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ubqln1Q8R317 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ubqln1Q8R317 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ubqln1Q8R317 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ubqln1Q8R317 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ubqln1Q8R317 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.33■■□□□ 1.17
Ubqln1Q8R317 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
Ubqln1Q8R317 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.32■■□□□ 1.16
Ubqln1Q8R317 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ubqln1Q8R317 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Ubqln1Q8R317 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ubqln1Q8R317 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.31■■□□□ 1.16
Ubqln1Q8R317 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Ubqln1Q8R317 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ubqln1Q8R317 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Ubqln1Q8R317 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.29■■□□□ 1.16
Ubqln1Q8R317 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ubqln1Q8R317 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ubqln1Q8R317 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.27■■□□□ 1.16
Ubqln1Q8R317 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ubqln1Q8R317 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ubqln1Q8R317 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ubqln1Q8R317 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ubqln1Q8R317 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ubqln1Q8R317 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubqln1Q8R317 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubqln1Q8R317 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.26■■□□□ 1.15
Ubqln1Q8R317 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Ubqln1Q8R317 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubqln1Q8R317 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubqln1Q8R317 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ubqln1Q8R317 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Ubqln1Q8R317 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubqln1Q8R317 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms