Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim29Q8R043 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim29Q8R043 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim29Q8R043 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim29Q8R043 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smim29Q8R043 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim29Q8R043 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smim29Q8R043 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Smim29Q8R043 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim29Q8R043 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim29Q8R043 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim29Q8R043 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim29Q8R043 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smim29Q8R043 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim29Q8R043 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim29Q8R043 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim29Q8R043 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.13■□□□□ 0.01
Smim29Q8R043 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smim29Q8R043 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.12■□□□□ 0.01
Smim29Q8R043 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim29Q8R043 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim29Q8R043 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smim29Q8R043 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smim29Q8R043 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim29Q8R043 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.11■□□□□ 0.01
Smim29Q8R043 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Smim29Q8R043 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smim29Q8R043 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim29Q8R043 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim29Q8R043 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim29Q8R043 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.09■□□□□ 0.01
Smim29Q8R043 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smim29Q8R043 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim29Q8R043 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim29Q8R043 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim29Q8R043 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim29Q8R043 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smim29Q8R043 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.07■□□□□ 0
Smim29Q8R043 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smim29Q8R043 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smim29Q8R043 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Smim29Q8R043 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.06■□□□□ 0
Smim29Q8R043 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.06■□□□□ 0
Smim29Q8R043 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smim29Q8R043 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Smim29Q8R043 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.05■□□□□ -0
Smim29Q8R043 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smim29Q8R043 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smim29Q8R043 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smim29Q8R043 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smim29Q8R043 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim29Q8R043 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim29Q8R043 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smim29Q8R043 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.02■□□□□ -0
Smim29Q8R043 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Smim29Q8R043 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smim29Q8R043 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smim29Q8R043 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim29Q8R043 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim29Q8R043 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smim29Q8R043 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smim29Q8R043 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smim29Q8R043 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smim29Q8R043 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smim29Q8R043 Zfp131-205ENSMUST00000223812 663 ntBASIC14.99□□□□□ -0.01
Smim29Q8R043 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smim29Q8R043 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smim29Q8R043 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Smim29Q8R043 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smim29Q8R043 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smim29Q8R043 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smim29Q8R043 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.98□□□□□ -0.01
Smim29Q8R043 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.98□□□□□ -0.01
Smim29Q8R043 AC157572.2-201ENSMUST00000226970 908 ntBASIC14.98□□□□□ -0.01
Smim29Q8R043 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smim29Q8R043 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smim29Q8R043 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smim29Q8R043 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Smim29Q8R043 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smim29Q8R043 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Smim29Q8R043 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC14.96□□□□□ -0.01
Smim29Q8R043 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Smim29Q8R043 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.95□□□□□ -0.02
Smim29Q8R043 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smim29Q8R043 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC14.94□□□□□ -0.02
Smim29Q8R043 Gm9397-201ENSMUST00000200125 605 ntBASIC14.94□□□□□ -0.02
Smim29Q8R043 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC14.94□□□□□ -0.02
Smim29Q8R043 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smim29Q8R043 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smim29Q8R043 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smim29Q8R043 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Smim29Q8R043 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.92□□□□□ -0.02
Smim29Q8R043 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smim29Q8R043 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC14.92□□□□□ -0.02
Smim29Q8R043 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC14.91□□□□□ -0.02
Smim29Q8R043 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim29Q8R043 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smim29Q8R043 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smim29Q8R043 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC14.9□□□□□ -0.02
Smim29Q8R043 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms