Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim29Q8R043 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim29Q8R043 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim29Q8R043 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim29Q8R043 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smim29Q8R043 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim29Q8R043 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smim29Q8R043 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Smim29Q8R043 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim29Q8R043 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim29Q8R043 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim29Q8R043 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim29Q8R043 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smim29Q8R043 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim29Q8R043 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim29Q8R043 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim29Q8R043 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.13■□□□□ 0.01
Smim29Q8R043 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smim29Q8R043 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.12■□□□□ 0.01
Smim29Q8R043 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim29Q8R043 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim29Q8R043 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smim29Q8R043 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smim29Q8R043 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim29Q8R043 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.11■□□□□ 0.01
Smim29Q8R043 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Smim29Q8R043 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smim29Q8R043 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim29Q8R043 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smim29Q8R043 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smim29Q8R043 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.09■□□□□ 0.01
Smim29Q8R043 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smim29Q8R043 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim29Q8R043 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim29Q8R043 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim29Q8R043 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smim29Q8R043 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smim29Q8R043 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.07■□□□□ 0
Smim29Q8R043 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smim29Q8R043 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smim29Q8R043 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Smim29Q8R043 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.06■□□□□ 0
Smim29Q8R043 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.06■□□□□ 0
Smim29Q8R043 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smim29Q8R043 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Smim29Q8R043 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.05■□□□□ -0
Smim29Q8R043 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smim29Q8R043 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smim29Q8R043 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smim29Q8R043 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smim29Q8R043 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim29Q8R043 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smim29Q8R043 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smim29Q8R043 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.02■□□□□ -0
Smim29Q8R043 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Smim29Q8R043 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smim29Q8R043 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smim29Q8R043 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim29Q8R043 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smim29Q8R043 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smim29Q8R043 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smim29Q8R043 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smim29Q8R043 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smim29Q8R043 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smim29Q8R043 Zfp131-205ENSMUST00000223812 663 ntBASIC14.99□□□□□ -0.01
Smim29Q8R043 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smim29Q8R043 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smim29Q8R043 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Smim29Q8R043 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smim29Q8R043 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smim29Q8R043 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smim29Q8R043 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.98□□□□□ -0.01
Smim29Q8R043 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.98□□□□□ -0.01
Smim29Q8R043 AC157572.2-201ENSMUST00000226970 908 ntBASIC14.98□□□□□ -0.01
Smim29Q8R043 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smim29Q8R043 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smim29Q8R043 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smim29Q8R043 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Smim29Q8R043 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smim29Q8R043 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Smim29Q8R043 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC14.96□□□□□ -0.01
Smim29Q8R043 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Smim29Q8R043 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.95□□□□□ -0.02
Smim29Q8R043 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smim29Q8R043 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC14.94□□□□□ -0.02
Smim29Q8R043 Gm9397-201ENSMUST00000200125 605 ntBASIC14.94□□□□□ -0.02
Smim29Q8R043 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC14.94□□□□□ -0.02
Smim29Q8R043 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smim29Q8R043 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smim29Q8R043 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smim29Q8R043 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Smim29Q8R043 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.92□□□□□ -0.02
Smim29Q8R043 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smim29Q8R043 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC14.92□□□□□ -0.02
Smim29Q8R043 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC14.91□□□□□ -0.02
Smim29Q8R043 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim29Q8R043 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smim29Q8R043 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smim29Q8R043 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC14.9□□□□□ -0.02
Smim29Q8R043 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 141.5 ms