Protein–RNA interactions for Protein: Q8K4Q6

Neil1, Endonuclease 8-like 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Neil1Q8K4Q6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Neil1Q8K4Q6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Neil1Q8K4Q6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Neil1Q8K4Q6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Neil1Q8K4Q6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Neil1Q8K4Q6 Gm45855-201ENSMUST00000212546 880 ntBASIC20.61■□□□□ 0.89
Neil1Q8K4Q6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Neil1Q8K4Q6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Neil1Q8K4Q6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Neil1Q8K4Q6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Neil1Q8K4Q6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Neil1Q8K4Q6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Neil1Q8K4Q6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Neil1Q8K4Q6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Neil1Q8K4Q6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Neil1Q8K4Q6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Neil1Q8K4Q6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.59■□□□□ 0.89
Neil1Q8K4Q6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Neil1Q8K4Q6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Neil1Q8K4Q6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Neil1Q8K4Q6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Neil1Q8K4Q6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Neil1Q8K4Q6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Neil1Q8K4Q6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Neil1Q8K4Q6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Neil1Q8K4Q6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Neil1Q8K4Q6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Neil1Q8K4Q6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.55■□□□□ 0.88
Neil1Q8K4Q6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Neil1Q8K4Q6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.55■□□□□ 0.88
Neil1Q8K4Q6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Neil1Q8K4Q6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Neil1Q8K4Q6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Neil1Q8K4Q6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Neil1Q8K4Q6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.54■□□□□ 0.88
Neil1Q8K4Q6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Neil1Q8K4Q6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Neil1Q8K4Q6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.52■□□□□ 0.88
Neil1Q8K4Q6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Neil1Q8K4Q6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Neil1Q8K4Q6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Neil1Q8K4Q6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Neil1Q8K4Q6 Gm9397-201ENSMUST00000200125 605 ntBASIC20.51■□□□□ 0.87
Neil1Q8K4Q6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Neil1Q8K4Q6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Neil1Q8K4Q6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Neil1Q8K4Q6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Neil1Q8K4Q6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Neil1Q8K4Q6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Neil1Q8K4Q6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Neil1Q8K4Q6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Neil1Q8K4Q6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Neil1Q8K4Q6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Neil1Q8K4Q6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Neil1Q8K4Q6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Neil1Q8K4Q6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Neil1Q8K4Q6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Neil1Q8K4Q6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Neil1Q8K4Q6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Neil1Q8K4Q6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Neil1Q8K4Q6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Neil1Q8K4Q6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Neil1Q8K4Q6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.47■□□□□ 0.87
Neil1Q8K4Q6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Neil1Q8K4Q6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Neil1Q8K4Q6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.46■□□□□ 0.87
Neil1Q8K4Q6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Neil1Q8K4Q6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Neil1Q8K4Q6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.45■□□□□ 0.86
Neil1Q8K4Q6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Neil1Q8K4Q6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Neil1Q8K4Q6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Neil1Q8K4Q6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Neil1Q8K4Q6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Neil1Q8K4Q6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.44■□□□□ 0.86
Neil1Q8K4Q6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.43■□□□□ 0.86
Neil1Q8K4Q6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.43■□□□□ 0.86
Neil1Q8K4Q6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Neil1Q8K4Q6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Neil1Q8K4Q6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Neil1Q8K4Q6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Neil1Q8K4Q6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Neil1Q8K4Q6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.41■□□□□ 0.86
Neil1Q8K4Q6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Neil1Q8K4Q6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Neil1Q8K4Q6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Neil1Q8K4Q6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Neil1Q8K4Q6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Neil1Q8K4Q6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Neil1Q8K4Q6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Neil1Q8K4Q6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Neil1Q8K4Q6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.37■□□□□ 0.85
Neil1Q8K4Q6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Neil1Q8K4Q6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Neil1Q8K4Q6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Neil1Q8K4Q6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Neil1Q8K4Q6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Neil1Q8K4Q6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Neil1Q8K4Q6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Neil1Q8K4Q6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 149.6 ms