Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pdlim5Q8CI51 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pdlim5Q8CI51 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.05■■□□□ 1.12
Pdlim5Q8CI51 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.05■■□□□ 1.12
Pdlim5Q8CI51 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pdlim5Q8CI51 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pdlim5Q8CI51 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.04■■□□□ 1.12
Pdlim5Q8CI51 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Pdlim5Q8CI51 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.03■■□□□ 1.12
Pdlim5Q8CI51 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.03■■□□□ 1.12
Pdlim5Q8CI51 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pdlim5Q8CI51 Gm24970-201ENSMUST00000175582 82 ntBASIC22.02■■□□□ 1.12
Pdlim5Q8CI51 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.02■■□□□ 1.12
Pdlim5Q8CI51 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.02■■□□□ 1.12
Pdlim5Q8CI51 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Pdlim5Q8CI51 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pdlim5Q8CI51 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Pdlim5Q8CI51 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pdlim5Q8CI51 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pdlim5Q8CI51 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pdlim5Q8CI51 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pdlim5Q8CI51 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pdlim5Q8CI51 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Pdlim5Q8CI51 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pdlim5Q8CI51 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.98■■□□□ 1.11
Pdlim5Q8CI51 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pdlim5Q8CI51 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.97■■□□□ 1.11
Pdlim5Q8CI51 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Pdlim5Q8CI51 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pdlim5Q8CI51 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pdlim5Q8CI51 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pdlim5Q8CI51 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Pdlim5Q8CI51 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pdlim5Q8CI51 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pdlim5Q8CI51 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pdlim5Q8CI51 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.94■■□□□ 1.1
Pdlim5Q8CI51 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.94■■□□□ 1.1
Pdlim5Q8CI51 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pdlim5Q8CI51 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.93■■□□□ 1.1
Pdlim5Q8CI51 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pdlim5Q8CI51 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Pdlim5Q8CI51 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdlim5Q8CI51 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdlim5Q8CI51 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Pdlim5Q8CI51 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Pdlim5Q8CI51 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pdlim5Q8CI51 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.9■■□□□ 1.1
Pdlim5Q8CI51 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pdlim5Q8CI51 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Pdlim5Q8CI51 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pdlim5Q8CI51 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.9■■□□□ 1.1
Pdlim5Q8CI51 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Pdlim5Q8CI51 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pdlim5Q8CI51 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pdlim5Q8CI51 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Pdlim5Q8CI51 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pdlim5Q8CI51 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pdlim5Q8CI51 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.88■■□□□ 1.09
Pdlim5Q8CI51 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pdlim5Q8CI51 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Pdlim5Q8CI51 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pdlim5Q8CI51 Gm45855-201ENSMUST00000212546 880 ntBASIC21.86■■□□□ 1.09
Pdlim5Q8CI51 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pdlim5Q8CI51 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pdlim5Q8CI51 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pdlim5Q8CI51 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pdlim5Q8CI51 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pdlim5Q8CI51 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pdlim5Q8CI51 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pdlim5Q8CI51 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim5Q8CI51 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim5Q8CI51 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.82■■□□□ 1.08
Pdlim5Q8CI51 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim5Q8CI51 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim5Q8CI51 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdlim5Q8CI51 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
Pdlim5Q8CI51 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdlim5Q8CI51 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Pdlim5Q8CI51 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim5Q8CI51 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim5Q8CI51 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim5Q8CI51 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdlim5Q8CI51 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdlim5Q8CI51 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdlim5Q8CI51 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdlim5Q8CI51 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdlim5Q8CI51 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim5Q8CI51 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim5Q8CI51 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pdlim5Q8CI51 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim5Q8CI51 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim5Q8CI51 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim5Q8CI51 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim5Q8CI51 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim5Q8CI51 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Pdlim5Q8CI51 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Pdlim5Q8CI51 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim5Q8CI51 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim5Q8CI51 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim5Q8CI51 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms