Protein–RNA interactions for Protein: Q8CGF5

Tmem56, Transmembrane protein 56, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem56Q8CGF5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tmem56Q8CGF5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tmem56Q8CGF5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmem56Q8CGF5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmem56Q8CGF5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmem56Q8CGF5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmem56Q8CGF5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem56Q8CGF5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem56Q8CGF5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem56Q8CGF5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem56Q8CGF5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tmem56Q8CGF5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.4■□□□□ 0.86
Tmem56Q8CGF5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmem56Q8CGF5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tmem56Q8CGF5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tmem56Q8CGF5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem56Q8CGF5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Tmem56Q8CGF5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem56Q8CGF5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem56Q8CGF5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem56Q8CGF5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem56Q8CGF5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem56Q8CGF5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.36■□□□□ 0.85
Tmem56Q8CGF5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem56Q8CGF5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem56Q8CGF5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.35■□□□□ 0.85
Tmem56Q8CGF5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem56Q8CGF5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem56Q8CGF5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem56Q8CGF5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem56Q8CGF5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem56Q8CGF5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.34■□□□□ 0.85
Tmem56Q8CGF5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem56Q8CGF5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem56Q8CGF5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem56Q8CGF5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.33■□□□□ 0.85
Tmem56Q8CGF5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem56Q8CGF5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem56Q8CGF5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem56Q8CGF5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Tmem56Q8CGF5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem56Q8CGF5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem56Q8CGF5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem56Q8CGF5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Tmem56Q8CGF5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem56Q8CGF5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem56Q8CGF5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem56Q8CGF5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem56Q8CGF5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.3■□□□□ 0.84
Tmem56Q8CGF5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.3■□□□□ 0.84
Tmem56Q8CGF5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tmem56Q8CGF5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmem56Q8CGF5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Tmem56Q8CGF5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.29■□□□□ 0.84
Tmem56Q8CGF5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.29■□□□□ 0.84
Tmem56Q8CGF5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.29■□□□□ 0.84
Tmem56Q8CGF5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tmem56Q8CGF5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.27■□□□□ 0.84
Tmem56Q8CGF5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmem56Q8CGF5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tmem56Q8CGF5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmem56Q8CGF5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmem56Q8CGF5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmem56Q8CGF5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tmem56Q8CGF5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tmem56Q8CGF5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmem56Q8CGF5 Gm30023-201ENSMUST00000197970 889 ntBASIC20.24■□□□□ 0.83
Tmem56Q8CGF5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.24■□□□□ 0.83
Tmem56Q8CGF5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tmem56Q8CGF5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmem56Q8CGF5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmem56Q8CGF5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tmem56Q8CGF5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Tmem56Q8CGF5 Nkain2-201ENSMUST00000092602 558 ntBASIC20.23■□□□□ 0.83
Tmem56Q8CGF5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmem56Q8CGF5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tmem56Q8CGF5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tmem56Q8CGF5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Tmem56Q8CGF5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmem56Q8CGF5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmem56Q8CGF5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tmem56Q8CGF5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Tmem56Q8CGF5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmem56Q8CGF5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Tmem56Q8CGF5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.2■□□□□ 0.82
Tmem56Q8CGF5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmem56Q8CGF5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmem56Q8CGF5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Tmem56Q8CGF5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tmem56Q8CGF5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmem56Q8CGF5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tmem56Q8CGF5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tmem56Q8CGF5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmem56Q8CGF5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tmem56Q8CGF5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Tmem56Q8CGF5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmem56Q8CGF5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Tmem56Q8CGF5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
Tmem56Q8CGF5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.15■□□□□ 0.82
Tmem56Q8CGF5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 130.4 ms