Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Mir6538-201ENSMUST00000183713 110 ntBASIC23.58■■□□□ 1.37
Rab43Q8CG50 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Rab43Q8CG50 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.58■■□□□ 1.37
Rab43Q8CG50 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rab43Q8CG50 Particl-201ENSMUST00000205370 1560 ntBASIC23.57■■□□□ 1.36
Rab43Q8CG50 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rab43Q8CG50 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rab43Q8CG50 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Rab43Q8CG50 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.56■■□□□ 1.36
Rab43Q8CG50 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.56■■□□□ 1.36
Rab43Q8CG50 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rab43Q8CG50 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.56■■□□□ 1.36
Rab43Q8CG50 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rab43Q8CG50 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rab43Q8CG50 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rab43Q8CG50 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rab43Q8CG50 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rab43Q8CG50 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rab43Q8CG50 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rab43Q8CG50 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Rab43Q8CG50 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rab43Q8CG50 Gm11175-201ENSMUST00000116172 543 ntBASIC23.51■■□□□ 1.35
Rab43Q8CG50 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rab43Q8CG50 Gm6311-201ENSMUST00000073790 878 ntBASIC23.51■■□□□ 1.35
Rab43Q8CG50 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.49■■□□□ 1.35
Rab43Q8CG50 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rab43Q8CG50 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rab43Q8CG50 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rab43Q8CG50 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.47■■□□□ 1.35
Rab43Q8CG50 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rab43Q8CG50 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rab43Q8CG50 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Rab43Q8CG50 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rab43Q8CG50 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rab43Q8CG50 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rab43Q8CG50 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rab43Q8CG50 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Rab43Q8CG50 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rab43Q8CG50 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
Rab43Q8CG50 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rab43Q8CG50 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rab43Q8CG50 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rab43Q8CG50 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Rab43Q8CG50 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Rab43Q8CG50 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rab43Q8CG50 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Rab43Q8CG50 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.41■■□□□ 1.34
Rab43Q8CG50 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.41■■□□□ 1.34
Rab43Q8CG50 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Rab43Q8CG50 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Rab43Q8CG50 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rab43Q8CG50 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rab43Q8CG50 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Rab43Q8CG50 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rab43Q8CG50 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rab43Q8CG50 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.37■■□□□ 1.33
Rab43Q8CG50 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rab43Q8CG50 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rab43Q8CG50 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rab43Q8CG50 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Rab43Q8CG50 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.35■■□□□ 1.33
Rab43Q8CG50 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rab43Q8CG50 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.33■■□□□ 1.33
Rab43Q8CG50 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rab43Q8CG50 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rab43Q8CG50 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rab43Q8CG50 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rab43Q8CG50 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rab43Q8CG50 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Rab43Q8CG50 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rab43Q8CG50 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rab43Q8CG50 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rab43Q8CG50 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rab43Q8CG50 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rab43Q8CG50 Cap2-205ENSMUST00000225824 1634 ntBASIC23.29■■□□□ 1.32
Rab43Q8CG50 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab43Q8CG50 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.27■■□□□ 1.32
Rab43Q8CG50 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Rab43Q8CG50 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Rab43Q8CG50 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rab43Q8CG50 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rab43Q8CG50 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.25■■□□□ 1.31
Rab43Q8CG50 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Rab43Q8CG50 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rab43Q8CG50 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rab43Q8CG50 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Rab43Q8CG50 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab43Q8CG50 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab43Q8CG50 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab43Q8CG50 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab43Q8CG50 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab43Q8CG50 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab43Q8CG50 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rab43Q8CG50 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rab43Q8CG50 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab43Q8CG50 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab43Q8CG50 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab43Q8CG50 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.2■■□□□ 1.3
Rab43Q8CG50 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab43Q8CG50 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms