Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.89■■■□□ 2.38
Smc5Q8CG46 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
Smc5Q8CG46 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Smc5Q8CG46 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Smc5Q8CG46 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Smc5Q8CG46 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Smc5Q8CG46 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Smc5Q8CG46 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Smc5Q8CG46 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Smc5Q8CG46 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Smc5Q8CG46 AC122428.3-201ENSMUST00000215551 2290 ntBASIC29.85■■■□□ 2.37
Smc5Q8CG46 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Smc5Q8CG46 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Smc5Q8CG46 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Smc5Q8CG46 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
Smc5Q8CG46 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Smc5Q8CG46 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Smc5Q8CG46 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Smc5Q8CG46 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Smc5Q8CG46 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Smc5Q8CG46 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Smc5Q8CG46 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Smc5Q8CG46 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Smc5Q8CG46 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Smc5Q8CG46 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
Smc5Q8CG46 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Smc5Q8CG46 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Smc5Q8CG46 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Smc5Q8CG46 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Smc5Q8CG46 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Smc5Q8CG46 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.73■■■□□ 2.35
Smc5Q8CG46 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Smc5Q8CG46 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Smc5Q8CG46 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Smc5Q8CG46 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Smc5Q8CG46 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.71■■■□□ 2.35
Smc5Q8CG46 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.71■■■□□ 2.35
Smc5Q8CG46 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Smc5Q8CG46 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Smc5Q8CG46 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Smc5Q8CG46 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Smc5Q8CG46 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Smc5Q8CG46 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Smc5Q8CG46 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Smc5Q8CG46 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Smc5Q8CG46 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Smc5Q8CG46 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
Smc5Q8CG46 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Smc5Q8CG46 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Smc5Q8CG46 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Smc5Q8CG46 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
Smc5Q8CG46 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.65■■■□□ 2.34
Smc5Q8CG46 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Smc5Q8CG46 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Smc5Q8CG46 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC29.64■■■□□ 2.34
Smc5Q8CG46 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Smc5Q8CG46 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Smc5Q8CG46 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
Smc5Q8CG46 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Smc5Q8CG46 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC29.61■■■□□ 2.33
Smc5Q8CG46 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Smc5Q8CG46 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.61■■■□□ 2.33
Smc5Q8CG46 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.61■■■□□ 2.33
Smc5Q8CG46 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.6■■■□□ 2.33
Smc5Q8CG46 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
Smc5Q8CG46 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Smc5Q8CG46 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Smc5Q8CG46 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
Smc5Q8CG46 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Smc5Q8CG46 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Smc5Q8CG46 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC29.57■■■□□ 2.32
Smc5Q8CG46 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Smc5Q8CG46 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Smc5Q8CG46 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC29.56■■■□□ 2.32
Smc5Q8CG46 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
Smc5Q8CG46 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Smc5Q8CG46 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Smc5Q8CG46 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Smc5Q8CG46 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Smc5Q8CG46 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
Smc5Q8CG46 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Smc5Q8CG46 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Smc5Q8CG46 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Smc5Q8CG46 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
Smc5Q8CG46 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.53■■■□□ 2.32
Smc5Q8CG46 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Smc5Q8CG46 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Smc5Q8CG46 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
Smc5Q8CG46 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.51■■■□□ 2.31
Smc5Q8CG46 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.51■■■□□ 2.31
Smc5Q8CG46 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Smc5Q8CG46 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
Smc5Q8CG46 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Smc5Q8CG46 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Smc5Q8CG46 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Smc5Q8CG46 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Smc5Q8CG46 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Smc5Q8CG46 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Smc5Q8CG46 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Smc5Q8CG46 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms