Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.09■■□□□ 1.77
Lin9Q8C735 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Lin9Q8C735 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.08■■□□□ 1.77
Lin9Q8C735 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Lin9Q8C735 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
Lin9Q8C735 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.07■■□□□ 1.76
Lin9Q8C735 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Lin9Q8C735 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Lin9Q8C735 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Lin9Q8C735 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Lin9Q8C735 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Lin9Q8C735 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Lin9Q8C735 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Lin9Q8C735 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.05■■□□□ 1.76
Lin9Q8C735 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Lin9Q8C735 Nkain2-201ENSMUST00000092602 558 ntBASIC26.04■■□□□ 1.76
Lin9Q8C735 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Lin9Q8C735 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Lin9Q8C735 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Lin9Q8C735 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Lin9Q8C735 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Lin9Q8C735 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Lin9Q8C735 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Lin9Q8C735 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
Lin9Q8C735 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Lin9Q8C735 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
Lin9Q8C735 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Lin9Q8C735 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Lin9Q8C735 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26■■□□□ 1.75
Lin9Q8C735 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Lin9Q8C735 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26■■□□□ 1.75
Lin9Q8C735 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Lin9Q8C735 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.98■■□□□ 1.75
Lin9Q8C735 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Lin9Q8C735 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Lin9Q8C735 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
Lin9Q8C735 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Lin9Q8C735 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Lin9Q8C735 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
Lin9Q8C735 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Lin9Q8C735 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.95■■□□□ 1.74
Lin9Q8C735 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.94■■□□□ 1.74
Lin9Q8C735 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Lin9Q8C735 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Lin9Q8C735 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Lin9Q8C735 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Lin9Q8C735 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Lin9Q8C735 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Lin9Q8C735 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Lin9Q8C735 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Lin9Q8C735 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Lin9Q8C735 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
Lin9Q8C735 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.88■■□□□ 1.73
Lin9Q8C735 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
Lin9Q8C735 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Lin9Q8C735 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.87■■□□□ 1.73
Lin9Q8C735 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Lin9Q8C735 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Lin9Q8C735 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Lin9Q8C735 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
Lin9Q8C735 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Lin9Q8C735 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.84■■□□□ 1.73
Lin9Q8C735 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Lin9Q8C735 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Lin9Q8C735 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Lin9Q8C735 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Lin9Q8C735 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Lin9Q8C735 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Lin9Q8C735 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Lin9Q8C735 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Lin9Q8C735 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
Lin9Q8C735 Gm7432-201ENSMUST00000210343 879 ntBASIC25.79■■□□□ 1.72
Lin9Q8C735 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Lin9Q8C735 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Lin9Q8C735 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Lin9Q8C735 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Lin9Q8C735 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Lin9Q8C735 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Lin9Q8C735 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.75■■□□□ 1.71
Lin9Q8C735 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.75■■□□□ 1.71
Lin9Q8C735 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Lin9Q8C735 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Lin9Q8C735 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Lin9Q8C735 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Lin9Q8C735 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Lin9Q8C735 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.73■■□□□ 1.71
Lin9Q8C735 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Lin9Q8C735 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Lin9Q8C735 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Lin9Q8C735 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.72■■□□□ 1.71
Lin9Q8C735 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.72■■□□□ 1.71
Lin9Q8C735 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Lin9Q8C735 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Lin9Q8C735 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.71■■□□□ 1.71
Lin9Q8C735 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Lin9Q8C735 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Lin9Q8C735 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Lin9Q8C735 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Lin9Q8C735 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Lin9Q8C735 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms