Protein–RNA interactions for Protein: Q8BWB1

Synpo2l, Synaptopodin 2-like protein, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo2lQ8BWB1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.13■■□□□ 1.13
Synpo2lQ8BWB1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Synpo2lQ8BWB1 Nkain2-201ENSMUST00000092602 558 ntBASIC22.13■■□□□ 1.13
Synpo2lQ8BWB1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.12■■□□□ 1.13
Synpo2lQ8BWB1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.12■■□□□ 1.13
Synpo2lQ8BWB1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Synpo2lQ8BWB1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Synpo2lQ8BWB1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
Synpo2lQ8BWB1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Synpo2lQ8BWB1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Synpo2lQ8BWB1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Synpo2lQ8BWB1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Synpo2lQ8BWB1 Gm6821-201ENSMUST00000107540 542 ntBASIC22.08■■□□□ 1.13
Synpo2lQ8BWB1 Gm30023-201ENSMUST00000197970 889 ntBASIC22.08■■□□□ 1.13
Synpo2lQ8BWB1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Synpo2lQ8BWB1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Synpo2lQ8BWB1 Gm8503-201ENSMUST00000118131 455 ntBASIC22.06■■□□□ 1.12
Synpo2lQ8BWB1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Synpo2lQ8BWB1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Synpo2lQ8BWB1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Synpo2lQ8BWB1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.04■■□□□ 1.12
Synpo2lQ8BWB1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Synpo2lQ8BWB1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Synpo2lQ8BWB1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Synpo2lQ8BWB1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Synpo2lQ8BWB1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.02■■□□□ 1.12
Synpo2lQ8BWB1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Synpo2lQ8BWB1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Synpo2lQ8BWB1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Synpo2lQ8BWB1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.01■■□□□ 1.11
Synpo2lQ8BWB1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Synpo2lQ8BWB1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Synpo2lQ8BWB1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.01■■□□□ 1.11
Synpo2lQ8BWB1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.01■■□□□ 1.11
Synpo2lQ8BWB1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Synpo2lQ8BWB1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22■■□□□ 1.11
Synpo2lQ8BWB1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Synpo2lQ8BWB1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Synpo2lQ8BWB1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Synpo2lQ8BWB1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.99■■□□□ 1.11
Synpo2lQ8BWB1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Synpo2lQ8BWB1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Synpo2lQ8BWB1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Synpo2lQ8BWB1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Synpo2lQ8BWB1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Synpo2lQ8BWB1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Synpo2lQ8BWB1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Synpo2lQ8BWB1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Synpo2lQ8BWB1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.97■■□□□ 1.11
Synpo2lQ8BWB1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.96■■□□□ 1.11
Synpo2lQ8BWB1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Synpo2lQ8BWB1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Synpo2lQ8BWB1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Synpo2lQ8BWB1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Synpo2lQ8BWB1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Synpo2lQ8BWB1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Synpo2lQ8BWB1 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.94■■□□□ 1.1
Synpo2lQ8BWB1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.94■■□□□ 1.1
Synpo2lQ8BWB1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Synpo2lQ8BWB1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Synpo2lQ8BWB1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Synpo2lQ8BWB1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Synpo2lQ8BWB1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Synpo2lQ8BWB1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Synpo2lQ8BWB1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Synpo2lQ8BWB1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Synpo2lQ8BWB1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Synpo2lQ8BWB1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.9■■□□□ 1.1
Synpo2lQ8BWB1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Synpo2lQ8BWB1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.89■■□□□ 1.09
Synpo2lQ8BWB1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Synpo2lQ8BWB1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Synpo2lQ8BWB1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Synpo2lQ8BWB1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Synpo2lQ8BWB1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.88■■□□□ 1.09
Synpo2lQ8BWB1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Synpo2lQ8BWB1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.88■■□□□ 1.09
Synpo2lQ8BWB1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Synpo2lQ8BWB1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Synpo2lQ8BWB1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Synpo2lQ8BWB1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Synpo2lQ8BWB1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Synpo2lQ8BWB1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.86■■□□□ 1.09
Synpo2lQ8BWB1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Synpo2lQ8BWB1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Synpo2lQ8BWB1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Synpo2lQ8BWB1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
Synpo2lQ8BWB1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.84■■□□□ 1.09
Synpo2lQ8BWB1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Synpo2lQ8BWB1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.83■■□□□ 1.08
Synpo2lQ8BWB1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Synpo2lQ8BWB1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Synpo2lQ8BWB1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Synpo2lQ8BWB1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Synpo2lQ8BWB1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Synpo2lQ8BWB1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Synpo2lQ8BWB1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Synpo2lQ8BWB1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.81■■□□□ 1.08
Synpo2lQ8BWB1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Synpo2lQ8BWB1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 157.3 ms