Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdhr3Q8BL00 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdhr3Q8BL00 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdhr3Q8BL00 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdhr3Q8BL00 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Cdhr3Q8BL00 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdhr3Q8BL00 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.85■□□□□ 0.93
Cdhr3Q8BL00 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cdhr3Q8BL00 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdhr3Q8BL00 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdhr3Q8BL00 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdhr3Q8BL00 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdhr3Q8BL00 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cdhr3Q8BL00 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdhr3Q8BL00 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdhr3Q8BL00 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdhr3Q8BL00 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdhr3Q8BL00 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdhr3Q8BL00 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdhr3Q8BL00 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdhr3Q8BL00 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdhr3Q8BL00 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdhr3Q8BL00 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.78■□□□□ 0.92
Cdhr3Q8BL00 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdhr3Q8BL00 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cdhr3Q8BL00 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdhr3Q8BL00 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdhr3Q8BL00 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdhr3Q8BL00 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.75■□□□□ 0.91
Cdhr3Q8BL00 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdhr3Q8BL00 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdhr3Q8BL00 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdhr3Q8BL00 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdhr3Q8BL00 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdhr3Q8BL00 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdhr3Q8BL00 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cdhr3Q8BL00 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Cdhr3Q8BL00 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdhr3Q8BL00 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdhr3Q8BL00 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cdhr3Q8BL00 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdhr3Q8BL00 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdhr3Q8BL00 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdhr3Q8BL00 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cdhr3Q8BL00 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cdhr3Q8BL00 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdhr3Q8BL00 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdhr3Q8BL00 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdhr3Q8BL00 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdhr3Q8BL00 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.69■□□□□ 0.9
Cdhr3Q8BL00 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdhr3Q8BL00 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdhr3Q8BL00 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdhr3Q8BL00 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdhr3Q8BL00 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdhr3Q8BL00 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdhr3Q8BL00 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdhr3Q8BL00 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.66■□□□□ 0.9
Cdhr3Q8BL00 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.66■□□□□ 0.9
Cdhr3Q8BL00 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cdhr3Q8BL00 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Cdhr3Q8BL00 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.64■□□□□ 0.89
Cdhr3Q8BL00 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Cdhr3Q8BL00 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdhr3Q8BL00 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdhr3Q8BL00 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cdhr3Q8BL00 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cdhr3Q8BL00 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdhr3Q8BL00 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdhr3Q8BL00 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdhr3Q8BL00 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdhr3Q8BL00 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdhr3Q8BL00 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cdhr3Q8BL00 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.6■□□□□ 0.89
Cdhr3Q8BL00 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdhr3Q8BL00 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdhr3Q8BL00 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdhr3Q8BL00 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdhr3Q8BL00 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdhr3Q8BL00 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdhr3Q8BL00 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdhr3Q8BL00 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdhr3Q8BL00 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdhr3Q8BL00 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdhr3Q8BL00 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdhr3Q8BL00 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdhr3Q8BL00 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdhr3Q8BL00 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cdhr3Q8BL00 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdhr3Q8BL00 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdhr3Q8BL00 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdhr3Q8BL00 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr3Q8BL00 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr3Q8BL00 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr3Q8BL00 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr3Q8BL00 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdhr3Q8BL00 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdhr3Q8BL00 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdhr3Q8BL00 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdhr3Q8BL00 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms