Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Pcdhga7Q6DD96 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.13■■□□□ 1.29
Pcdhga7Q6DD96 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Pcdhga7Q6DD96 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhga7Q6DD96 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhga7Q6DD96 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.12■■□□□ 1.29
Pcdhga7Q6DD96 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhga7Q6DD96 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhga7Q6DD96 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhga7Q6DD96 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.1■■□□□ 1.29
Pcdhga7Q6DD96 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhga7Q6DD96 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhga7Q6DD96 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhga7Q6DD96 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhga7Q6DD96 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhga7Q6DD96 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Pcdhga7Q6DD96 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhga7Q6DD96 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhga7Q6DD96 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhga7Q6DD96 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhga7Q6DD96 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhga7Q6DD96 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhga7Q6DD96 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.05■■□□□ 1.28
Pcdhga7Q6DD96 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.05■■□□□ 1.28
Pcdhga7Q6DD96 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
Pcdhga7Q6DD96 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Pcdhga7Q6DD96 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.04■■□□□ 1.28
Pcdhga7Q6DD96 Gm9397-201ENSMUST00000200125 605 ntBASIC23.04■■□□□ 1.28
Pcdhga7Q6DD96 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Pcdhga7Q6DD96 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhga7Q6DD96 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhga7Q6DD96 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhga7Q6DD96 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhga7Q6DD96 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Pcdhga7Q6DD96 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.02■■□□□ 1.28
Pcdhga7Q6DD96 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhga7Q6DD96 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Pcdhga7Q6DD96 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga7Q6DD96 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.01■■□□□ 1.27
Pcdhga7Q6DD96 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Pcdhga7Q6DD96 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga7Q6DD96 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhga7Q6DD96 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdhga7Q6DD96 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhga7Q6DD96 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhga7Q6DD96 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.99■■□□□ 1.27
Pcdhga7Q6DD96 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhga7Q6DD96 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.98■■□□□ 1.27
Pcdhga7Q6DD96 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.98■■□□□ 1.27
Pcdhga7Q6DD96 Gm24970-201ENSMUST00000175582 82 ntBASIC22.97■■□□□ 1.27
Pcdhga7Q6DD96 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhga7Q6DD96 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhga7Q6DD96 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Pcdhga7Q6DD96 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.96■■□□□ 1.27
Pcdhga7Q6DD96 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.96■■□□□ 1.27
Pcdhga7Q6DD96 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
Pcdhga7Q6DD96 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.95■■□□□ 1.26
Pcdhga7Q6DD96 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhga7Q6DD96 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhga7Q6DD96 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhga7Q6DD96 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga7Q6DD96 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Pcdhga7Q6DD96 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Pcdhga7Q6DD96 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga7Q6DD96 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.93■■□□□ 1.26
Pcdhga7Q6DD96 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga7Q6DD96 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhga7Q6DD96 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
Pcdhga7Q6DD96 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.92■■□□□ 1.26
Pcdhga7Q6DD96 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.92■■□□□ 1.26
Pcdhga7Q6DD96 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhga7Q6DD96 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.91■■□□□ 1.26
Pcdhga7Q6DD96 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhga7Q6DD96 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Pcdhga7Q6DD96 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.9■■□□□ 1.26
Pcdhga7Q6DD96 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhga7Q6DD96 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhga7Q6DD96 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdhga7Q6DD96 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhga7Q6DD96 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Pcdhga7Q6DD96 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhga7Q6DD96 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhga7Q6DD96 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhga7Q6DD96 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhga7Q6DD96 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhga7Q6DD96 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhga7Q6DD96 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.86■■□□□ 1.25
Pcdhga7Q6DD96 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhga7Q6DD96 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga7Q6DD96 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga7Q6DD96 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga7Q6DD96 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga7Q6DD96 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
Pcdhga7Q6DD96 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga7Q6DD96 Gm45855-201ENSMUST00000212546 880 ntBASIC22.83■■□□□ 1.25
Pcdhga7Q6DD96 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhga7Q6DD96 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga7Q6DD96 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhga7Q6DD96 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhga7Q6DD96 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms