Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ptp4a1Q63739 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptp4a1Q63739 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ptp4a1Q63739 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptp4a1Q63739 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ptp4a1Q63739 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptp4a1Q63739 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.49■■□□□ 1.03
Ptp4a1Q63739 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.49■■□□□ 1.03
Ptp4a1Q63739 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptp4a1Q63739 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptp4a1Q63739 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptp4a1Q63739 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptp4a1Q63739 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptp4a1Q63739 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptp4a1Q63739 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ptp4a1Q63739 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Ptp4a1Q63739 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Ptp4a1Q63739 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.44■■□□□ 1.02
Ptp4a1Q63739 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptp4a1Q63739 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptp4a1Q63739 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.43■■□□□ 1.02
Ptp4a1Q63739 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptp4a1Q63739 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ptp4a1Q63739 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptp4a1Q63739 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.41■■□□□ 1.02
Ptp4a1Q63739 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ptp4a1Q63739 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ptp4a1Q63739 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptp4a1Q63739 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptp4a1Q63739 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptp4a1Q63739 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ptp4a1Q63739 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ptp4a1Q63739 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptp4a1Q63739 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptp4a1Q63739 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptp4a1Q63739 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptp4a1Q63739 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptp4a1Q63739 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptp4a1Q63739 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptp4a1Q63739 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ptp4a1Q63739 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptp4a1Q63739 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ptp4a1Q63739 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptp4a1Q63739 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptp4a1Q63739 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ptp4a1Q63739 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Ptp4a1Q63739 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptp4a1Q63739 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.34■■□□□ 1.01
Ptp4a1Q63739 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptp4a1Q63739 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ptp4a1Q63739 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.31■■□□□ 1
Ptp4a1Q63739 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptp4a1Q63739 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ptp4a1Q63739 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptp4a1Q63739 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptp4a1Q63739 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.29■■□□□ 1
Ptp4a1Q63739 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Ptp4a1Q63739 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.28■■□□□ 1
Ptp4a1Q63739 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.28■■□□□ 1
Ptp4a1Q63739 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptp4a1Q63739 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ptp4a1Q63739 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ptp4a1Q63739 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ptp4a1Q63739 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptp4a1Q63739 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Ptp4a1Q63739 Gm9397-201ENSMUST00000200125 605 ntBASIC21.25■□□□□ 0.99
Ptp4a1Q63739 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptp4a1Q63739 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Ptp4a1Q63739 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptp4a1Q63739 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptp4a1Q63739 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ptp4a1Q63739 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptp4a1Q63739 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptp4a1Q63739 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ptp4a1Q63739 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ptp4a1Q63739 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ptp4a1Q63739 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ptp4a1Q63739 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ptp4a1Q63739 Gm45855-201ENSMUST00000212546 880 ntBASIC21.2■□□□□ 0.98
Ptp4a1Q63739 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ptp4a1Q63739 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ptp4a1Q63739 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.19■□□□□ 0.98
Ptp4a1Q63739 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.19■□□□□ 0.98
Ptp4a1Q63739 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ptp4a1Q63739 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ptp4a1Q63739 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ptp4a1Q63739 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ptp4a1Q63739 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ptp4a1Q63739 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ptp4a1Q63739 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ptp4a1Q63739 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.16■□□□□ 0.98
Ptp4a1Q63739 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ptp4a1Q63739 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms