Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm11599-201ENSMUST00000118720 878 ntBASIC28.2■■■□□ 2.1
Scnn1aQ61180 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.18■■■□□ 2.1
Scnn1aQ61180 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Scnn1aQ61180 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.18■■■□□ 2.1
Scnn1aQ61180 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Scnn1aQ61180 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Scnn1aQ61180 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.17■■■□□ 2.1
Scnn1aQ61180 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Scnn1aQ61180 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Scnn1aQ61180 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Scnn1aQ61180 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Scnn1aQ61180 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Scnn1aQ61180 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Scnn1aQ61180 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Scnn1aQ61180 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Scnn1aQ61180 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.12■■■□□ 2.09
Scnn1aQ61180 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Scnn1aQ61180 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Scnn1aQ61180 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
Scnn1aQ61180 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Scnn1aQ61180 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Scnn1aQ61180 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.09■■■□□ 2.09
Scnn1aQ61180 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Scnn1aQ61180 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Scnn1aQ61180 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Scnn1aQ61180 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Scnn1aQ61180 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.07■■■□□ 2.08
Scnn1aQ61180 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.06■■■□□ 2.08
Scnn1aQ61180 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Scnn1aQ61180 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.04■■■□□ 2.08
Scnn1aQ61180 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Scnn1aQ61180 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Scnn1aQ61180 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Scnn1aQ61180 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Scnn1aQ61180 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
Scnn1aQ61180 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Scnn1aQ61180 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.99■■■□□ 2.07
Scnn1aQ61180 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Scnn1aQ61180 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Scnn1aQ61180 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Scnn1aQ61180 Particl-201ENSMUST00000205370 1560 ntBASIC27.96■■■□□ 2.07
Scnn1aQ61180 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
Scnn1aQ61180 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Scnn1aQ61180 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Scnn1aQ61180 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
Scnn1aQ61180 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Scnn1aQ61180 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Scnn1aQ61180 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Scnn1aQ61180 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Scnn1aQ61180 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.91■■■□□ 2.06
Scnn1aQ61180 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
Scnn1aQ61180 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
Scnn1aQ61180 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Scnn1aQ61180 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Scnn1aQ61180 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.88■■■□□ 2.05
Scnn1aQ61180 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.87■■■□□ 2.05
Scnn1aQ61180 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.86■■■□□ 2.05
Scnn1aQ61180 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Scnn1aQ61180 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Scnn1aQ61180 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Scnn1aQ61180 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Scnn1aQ61180 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.85■■■□□ 2.05
Scnn1aQ61180 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.85■■■□□ 2.05
Scnn1aQ61180 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.85■■■□□ 2.05
Scnn1aQ61180 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Scnn1aQ61180 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Scnn1aQ61180 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Scnn1aQ61180 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
Scnn1aQ61180 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.83■■■□□ 2.05
Scnn1aQ61180 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Scnn1aQ61180 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Scnn1aQ61180 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Scnn1aQ61180 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.82■■■□□ 2.04
Scnn1aQ61180 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.82■■■□□ 2.04
Scnn1aQ61180 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.81■■■□□ 2.04
Scnn1aQ61180 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Scnn1aQ61180 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Scnn1aQ61180 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.79■■■□□ 2.04
Scnn1aQ61180 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Scnn1aQ61180 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Scnn1aQ61180 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.78■■■□□ 2.04
Scnn1aQ61180 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.78■■■□□ 2.04
Scnn1aQ61180 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Scnn1aQ61180 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Scnn1aQ61180 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.75■■■□□ 2.03
Scnn1aQ61180 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Scnn1aQ61180 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Scnn1aQ61180 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Scnn1aQ61180 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
Scnn1aQ61180 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
Scnn1aQ61180 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Scnn1aQ61180 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.71■■■□□ 2.03
Scnn1aQ61180 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Scnn1aQ61180 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
Scnn1aQ61180 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Scnn1aQ61180 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.69■■■□□ 2.02
Scnn1aQ61180 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Scnn1aQ61180 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Scnn1aQ61180 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
Scnn1aQ61180 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms