Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Sdf4Q61112 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sdf4Q61112 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sdf4Q61112 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sdf4Q61112 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Sdf4Q61112 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sdf4Q61112 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sdf4Q61112 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Sdf4Q61112 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sdf4Q61112 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sdf4Q61112 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sdf4Q61112 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Sdf4Q61112 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Sdf4Q61112 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.18■■□□□ 1.46
Sdf4Q61112 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.18■■□□□ 1.46
Sdf4Q61112 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sdf4Q61112 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Sdf4Q61112 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Sdf4Q61112 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sdf4Q61112 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sdf4Q61112 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.17■■□□□ 1.46
Sdf4Q61112 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sdf4Q61112 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Sdf4Q61112 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.16■■□□□ 1.46
Sdf4Q61112 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sdf4Q61112 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Sdf4Q61112 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sdf4Q61112 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sdf4Q61112 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sdf4Q61112 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Sdf4Q61112 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
Sdf4Q61112 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Sdf4Q61112 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Sdf4Q61112 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Sdf4Q61112 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Sdf4Q61112 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sdf4Q61112 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
Sdf4Q61112 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Sdf4Q61112 Nkain2-201ENSMUST00000092602 558 ntBASIC24.11■■□□□ 1.45
Sdf4Q61112 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sdf4Q61112 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.1■■□□□ 1.45
Sdf4Q61112 Gm30023-201ENSMUST00000197970 889 ntBASIC24.1■■□□□ 1.45
Sdf4Q61112 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Sdf4Q61112 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Sdf4Q61112 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Sdf4Q61112 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Sdf4Q61112 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Sdf4Q61112 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.44
Sdf4Q61112 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Sdf4Q61112 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sdf4Q61112 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Sdf4Q61112 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.07■■□□□ 1.44
Sdf4Q61112 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sdf4Q61112 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Sdf4Q61112 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.05■■□□□ 1.44
Sdf4Q61112 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.05■■□□□ 1.44
Sdf4Q61112 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.05■■□□□ 1.44
Sdf4Q61112 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Sdf4Q61112 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Sdf4Q61112 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
Sdf4Q61112 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Sdf4Q61112 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sdf4Q61112 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sdf4Q61112 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sdf4Q61112 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Sdf4Q61112 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Sdf4Q61112 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24■■□□□ 1.43
Sdf4Q61112 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
Sdf4Q61112 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Sdf4Q61112 Gm6821-201ENSMUST00000107540 542 ntBASIC23.99■■□□□ 1.43
Sdf4Q61112 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.99■■□□□ 1.43
Sdf4Q61112 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.99■■□□□ 1.43
Sdf4Q61112 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sdf4Q61112 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sdf4Q61112 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Sdf4Q61112 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sdf4Q61112 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Sdf4Q61112 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Sdf4Q61112 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Sdf4Q61112 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sdf4Q61112 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Sdf4Q61112 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Sdf4Q61112 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Sdf4Q61112 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sdf4Q61112 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.93■■□□□ 1.42
Sdf4Q61112 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.93■■□□□ 1.42
Sdf4Q61112 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Sdf4Q61112 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Sdf4Q61112 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sdf4Q61112 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sdf4Q61112 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Sdf4Q61112 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.91■■□□□ 1.42
Sdf4Q61112 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Sdf4Q61112 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sdf4Q61112 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sdf4Q61112 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.9■■□□□ 1.42
Sdf4Q61112 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Sdf4Q61112 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sdf4Q61112 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Sdf4Q61112 Gm8503-201ENSMUST00000118131 455 ntBASIC23.89■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms