Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q3U1D9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q3U1D9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
Q3U1D9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Q3U1D9 Gm30023-201ENSMUST00000197970 889 ntBASIC20.93■□□□□ 0.94
Q3U1D9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q3U1D9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q3U1D9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q3U1D9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q3U1D9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Q3U1D9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.9■□□□□ 0.94
Q3U1D9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Q3U1D9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q3U1D9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Q3U1D9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q3U1D9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Q3U1D9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.89■□□□□ 0.93
Q3U1D9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q3U1D9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Q3U1D9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q3U1D9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Q3U1D9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q3U1D9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q3U1D9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q3U1D9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q3U1D9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Q3U1D9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.85■□□□□ 0.93
Q3U1D9 Zxda-201ENSMUST00000117281 2621 ntBASIC20.85■□□□□ 0.93
Q3U1D9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Q3U1D9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q3U1D9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q3U1D9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q3U1D9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Q3U1D9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.83■□□□□ 0.93
Q3U1D9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q3U1D9 Particl-201ENSMUST00000205370 1560 ntBASIC20.82■□□□□ 0.92
Q3U1D9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q3U1D9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q3U1D9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Q3U1D9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q3U1D9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Q3U1D9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Q3U1D9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.79■□□□□ 0.92
Q3U1D9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.77■□□□□ 0.92
Q3U1D9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Q3U1D9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q3U1D9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Q3U1D9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Q3U1D9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.75■□□□□ 0.91
Q3U1D9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q3U1D9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q3U1D9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Q3U1D9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.73■□□□□ 0.91
Q3U1D9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.73■□□□□ 0.91
Q3U1D9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q3U1D9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Q3U1D9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.7■□□□□ 0.9
Q3U1D9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q3U1D9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3U1D9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3U1D9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q3U1D9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3U1D9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3U1D9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3U1D9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q3U1D9 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.68■□□□□ 0.9
Q3U1D9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q3U1D9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Q3U1D9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.66■□□□□ 0.9
Q3U1D9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Q3U1D9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Q3U1D9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q3U1D9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q3U1D9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q3U1D9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q3U1D9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Q3U1D9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q3U1D9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Q3U1D9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.62■□□□□ 0.89
Q3U1D9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.62■□□□□ 0.89
Q3U1D9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q3U1D9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q3U1D9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q3U1D9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.61■□□□□ 0.89
Q3U1D9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Q3U1D9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Q3U1D9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.61■□□□□ 0.89
Q3U1D9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q3U1D9 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.6■□□□□ 0.89
Q3U1D9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Q3U1D9 Gm6311-201ENSMUST00000073790 878 ntBASIC20.58■□□□□ 0.89
Q3U1D9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Q3U1D9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Q3U1D9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Q3U1D9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.58■□□□□ 0.88
Q3U1D9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Q3U1D9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q3U1D9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q3U1D9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Q3U1D9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms