Protein–RNA interactions for Protein: Q3SXA2

Vmn1r11, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r11Q3SXA2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.52■■□□□ 1.04
Vmn1r11Q3SXA2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.52■■□□□ 1.03
Vmn1r11Q3SXA2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vmn1r11Q3SXA2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vmn1r11Q3SXA2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vmn1r11Q3SXA2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r11Q3SXA2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vmn1r11Q3SXA2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Vmn1r11Q3SXA2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Vmn1r11Q3SXA2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vmn1r11Q3SXA2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vmn1r11Q3SXA2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
Vmn1r11Q3SXA2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Vmn1r11Q3SXA2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Vmn1r11Q3SXA2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.46■■□□□ 1.03
Vmn1r11Q3SXA2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r11Q3SXA2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Vmn1r11Q3SXA2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r11Q3SXA2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Vmn1r11Q3SXA2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Vmn1r11Q3SXA2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Vmn1r11Q3SXA2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r11Q3SXA2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r11Q3SXA2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r11Q3SXA2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vmn1r11Q3SXA2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vmn1r11Q3SXA2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.43■■□□□ 1.02
Vmn1r11Q3SXA2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vmn1r11Q3SXA2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vmn1r11Q3SXA2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r11Q3SXA2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r11Q3SXA2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r11Q3SXA2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r11Q3SXA2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r11Q3SXA2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r11Q3SXA2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Vmn1r11Q3SXA2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r11Q3SXA2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r11Q3SXA2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r11Q3SXA2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r11Q3SXA2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vmn1r11Q3SXA2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.02
Vmn1r11Q3SXA2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r11Q3SXA2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Vmn1r11Q3SXA2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vmn1r11Q3SXA2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.38■■□□□ 1.01
Vmn1r11Q3SXA2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vmn1r11Q3SXA2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r11Q3SXA2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.37■■□□□ 1.01
Vmn1r11Q3SXA2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vmn1r11Q3SXA2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r11Q3SXA2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r11Q3SXA2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vmn1r11Q3SXA2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Vmn1r11Q3SXA2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Vmn1r11Q3SXA2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
Vmn1r11Q3SXA2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Vmn1r11Q3SXA2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vmn1r11Q3SXA2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vmn1r11Q3SXA2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Vmn1r11Q3SXA2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Vmn1r11Q3SXA2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Vmn1r11Q3SXA2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.31■■□□□ 1
Vmn1r11Q3SXA2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.31■■□□□ 1
Vmn1r11Q3SXA2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.31■■□□□ 1
Vmn1r11Q3SXA2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r11Q3SXA2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Vmn1r11Q3SXA2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r11Q3SXA2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r11Q3SXA2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r11Q3SXA2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r11Q3SXA2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r11Q3SXA2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vmn1r11Q3SXA2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vmn1r11Q3SXA2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vmn1r11Q3SXA2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.28■■□□□ 1
Vmn1r11Q3SXA2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vmn1r11Q3SXA2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vmn1r11Q3SXA2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Vmn1r11Q3SXA2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r11Q3SXA2 Gm30023-201ENSMUST00000197970 889 ntBASIC21.27■■□□□ 1
Vmn1r11Q3SXA2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r11Q3SXA2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r11Q3SXA2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r11Q3SXA2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r11Q3SXA2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Vmn1r11Q3SXA2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vmn1r11Q3SXA2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r11Q3SXA2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.25■□□□□ 0.99
Vmn1r11Q3SXA2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r11Q3SXA2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r11Q3SXA2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r11Q3SXA2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r11Q3SXA2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.25■□□□□ 0.99
Vmn1r11Q3SXA2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r11Q3SXA2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r11Q3SXA2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Vmn1r11Q3SXA2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Vmn1r11Q3SXA2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Vmn1r11Q3SXA2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms