Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.2■■■□□ 2.59
Nkx2-3P97334 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Nkx2-3P97334 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Nkx2-3P97334 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Nkx2-3P97334 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Nkx2-3P97334 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Nkx2-3P97334 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Nkx2-3P97334 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Nkx2-3P97334 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
Nkx2-3P97334 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Nkx2-3P97334 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Nkx2-3P97334 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Nkx2-3P97334 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Nkx2-3P97334 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Nkx2-3P97334 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Nkx2-3P97334 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Nkx2-3P97334 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Nkx2-3P97334 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Nkx2-3P97334 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Nkx2-3P97334 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Nkx2-3P97334 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
Nkx2-3P97334 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Nkx2-3P97334 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.1■■■□□ 2.57
Nkx2-3P97334 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Nkx2-3P97334 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Nkx2-3P97334 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
Nkx2-3P97334 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Nkx2-3P97334 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.07■■■□□ 2.56
Nkx2-3P97334 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Nkx2-3P97334 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Nkx2-3P97334 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Nkx2-3P97334 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.04■■■□□ 2.56
Nkx2-3P97334 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31.04■■■□□ 2.56
Nkx2-3P97334 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
Nkx2-3P97334 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.04■■■□□ 2.56
Nkx2-3P97334 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Nkx2-3P97334 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
Nkx2-3P97334 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Nkx2-3P97334 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Nkx2-3P97334 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Nkx2-3P97334 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
Nkx2-3P97334 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31■■■□□ 2.55
Nkx2-3P97334 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.99■■■□□ 2.55
Nkx2-3P97334 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.98■■■□□ 2.55
Nkx2-3P97334 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC30.98■■■□□ 2.55
Nkx2-3P97334 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.97■■■□□ 2.55
Nkx2-3P97334 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Nkx2-3P97334 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Nkx2-3P97334 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
Nkx2-3P97334 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
Nkx2-3P97334 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Nkx2-3P97334 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Nkx2-3P97334 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Nkx2-3P97334 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC30.92■■■□□ 2.54
Nkx2-3P97334 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.92■■■□□ 2.54
Nkx2-3P97334 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
Nkx2-3P97334 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
Nkx2-3P97334 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Nkx2-3P97334 Zxda-201ENSMUST00000117281 2621 ntBASIC30.9■■■□□ 2.54
Nkx2-3P97334 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Nkx2-3P97334 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC30.89■■■□□ 2.54
Nkx2-3P97334 AC167019.3-201ENSMUST00000228225 1266 ntBASIC30.89■■■□□ 2.54
Nkx2-3P97334 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.89■■■□□ 2.53
Nkx2-3P97334 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Nkx2-3P97334 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Nkx2-3P97334 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
Nkx2-3P97334 Mir6538-201ENSMUST00000183713 110 ntBASIC30.86■■■□□ 2.53
Nkx2-3P97334 Particl-201ENSMUST00000205370 1560 ntBASIC30.85■■■□□ 2.53
Nkx2-3P97334 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Nkx2-3P97334 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC30.84■■■□□ 2.53
Nkx2-3P97334 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
Nkx2-3P97334 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Nkx2-3P97334 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
Nkx2-3P97334 Cap2-205ENSMUST00000225824 1634 ntBASIC30.8■■■□□ 2.52
Nkx2-3P97334 Gm6311-201ENSMUST00000073790 878 ntBASIC30.8■■■□□ 2.52
Nkx2-3P97334 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Nkx2-3P97334 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.79■■■□□ 2.52
Nkx2-3P97334 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC30.77■■■□□ 2.52
Nkx2-3P97334 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
Nkx2-3P97334 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
Nkx2-3P97334 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Nkx2-3P97334 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Nkx2-3P97334 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Nkx2-3P97334 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Nkx2-3P97334 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Nkx2-3P97334 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Nkx2-3P97334 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Nkx2-3P97334 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Nkx2-3P97334 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC30.71■■■□□ 2.51
Nkx2-3P97334 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Nkx2-3P97334 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Nkx2-3P97334 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Nkx2-3P97334 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Nkx2-3P97334 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Nkx2-3P97334 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
Nkx2-3P97334 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Nkx2-3P97334 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Nkx2-3P97334 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Nkx2-3P97334 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30.68■■■□□ 2.5
Nkx2-3P97334 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.67■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms