Protein–RNA interactions for Protein: P47977

TIS11, mRNA decay factor CTH2, yeastyeast

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TIS11P47977 tE(CUC)DtE(CUC)D 72 nt8.14□□□□□ -1.11
TIS11P47977 tE(CUC)ItE(CUC)I 72 nt8.14□□□□□ -1.11
TIS11P47977 SBP1YHL034C 885 nt8.14□□□□□ -1.11
TIS11P47977 MOB1YIL106W 945 nt8.14□□□□□ -1.11
TIS11P47977 YDR467CYDR467C 327 nt8.13□□□□□ -1.11
TIS11P47977 GPM1YKL152C 744 nt8.13□□□□□ -1.11
TIS11P47977 YMR316C-BYMR316C-B 309 nt8.13□□□□□ -1.11
TIS11P47977 NAP1YKR048C 1254 nt8.12□□□□□ -1.11
TIS11P47977 NPP2YEL016C 1482 nt8.12□□□□□ -1.11
TIS11P47977 PTC6YCR079W 1329 nt8.11□□□□□ -1.11
TIS11P47977 ACO2YJL200C 2370 nt8.11□□□□□ -1.11
TIS11P47977 GAS1YMR307W 1680 nt8.11□□□□□ -1.11
TIS11P47977 CYT1YOR065W 930 nt8.09□□□□□ -1.11
TIS11P47977 GGA2YHR108W 1758 nt8.09□□□□□ -1.11
TIS11P47977 SLG1YOR008C 1137 nt8.08□□□□□ -1.12
TIS11P47977 YCR025CYCR025C 411 nt8.06□□□□□ -1.12
TIS11P47977 YPT11YNL304W 1254 nt8.06□□□□□ -1.12
TIS11P47977 ENO1YGR254W 1314 nt8.05□□□□□ -1.12
TIS11P47977 INH1YDL181W 258 nt8.05□□□□□ -1.12
TIS11P47977 LYS20YDL182W 1287 nt8.05□□□□□ -1.12
TIS11P47977 YFR020WYFR020W 699 nt8.04□□□□□ -1.12
TIS11P47977 YBL095WYBL095W 813 nt8.03□□□□□ -1.12
TIS11P47977 FET5YFL041W 1869 nt8.02□□□□□ -1.12
TIS11P47977 CYC3YAL039C 810 nt8.02□□□□□ -1.13
TIS11P47977 YLR280CYLR280C 351 nt8.02□□□□□ -1.13
TIS11P47977 SER2YGR208W 930 nt8.01□□□□□ -1.13
TIS11P47977 ERO1YML130C 1692 nt8□□□□□ -1.13
TIS11P47977 SRP102YKL154W 735 nt8□□□□□ -1.13
TIS11P47977 TGA1tA(UGC)A 73 nt7.99□□□□□ -1.13
TIS11P47977 tA(UGC)EtA(UGC)E 73 nt7.99□□□□□ -1.13
TIS11P47977 tA(UGC)GtA(UGC)G 73 nt7.99□□□□□ -1.13
TIS11P47977 tA(UGC)LtA(UGC)L 73 nt7.99□□□□□ -1.13
TIS11P47977 tA(UGC)OtA(UGC)O 73 nt7.99□□□□□ -1.13
TIS11P47977 SWM1YDR260C 513 nt7.99□□□□□ -1.13
TIS11P47977 AAC3YBR085W 924 nt7.99□□□□□ -1.13
TIS11P47977 AAT1YKL106W 1356 nt7.98□□□□□ -1.13
TIS11P47977 YHL008CYHL008C 1884 nt7.98□□□□□ -1.13
TIS11P47977 YMC2YBR104W 990 nt7.98□□□□□ -1.13
TIS11P47977 MTO1YGL236C 2010 nt7.98□□□□□ -1.13
TIS11P47977 TPO4YOR273C 1980 nt7.97□□□□□ -1.13
TIS11P47977 SAM50YNL026W 1455 nt7.96□□□□□ -1.13
TIS11P47977 TRP2YER090W 1524 nt7.95□□□□□ -1.14
TIS11P47977 YGR210CYGR210C 1236 nt7.95□□□□□ -1.14
TIS11P47977 RSM7YJR113C 744 nt7.95□□□□□ -1.14
TIS11P47977 NBA1YOL070C 1506 nt7.94□□□□□ -1.14
TIS11P47977 HTS1YPR033C 1641 nt7.94□□□□□ -1.14
TIS11P47977 MRS4YKR052C 915 nt7.94□□□□□ -1.14
TIS11P47977 TMS1YDR105C 1422 nt7.94□□□□□ -1.14
TIS11P47977 YLR072WYLR072W 2082 nt7.93□□□□□ -1.14
TIS11P47977 THI6YPL214C 1623 nt7.92□□□□□ -1.14
TIS11P47977 RNA170RNA170 169 nt7.92□□□□□ -1.14
TIS11P47977 TPN1YGL186C 1740 nt7.92□□□□□ -1.14
TIS11P47977 YCP4YCR004C 744 nt7.91□□□□□ -1.14
TIS11P47977 snR86snR86 1004 nt7.91□□□□□ -1.14
TIS11P47977 HXT11YOL156W 1704 nt7.91□□□□□ -1.14
TIS11P47977 YBR056WYBR056W 1506 nt7.9□□□□□ -1.14
TIS11P47977 MEP1YGR121C 1479 nt7.89□□□□□ -1.15
TIS11P47977 YJR149WYJR149W 1215 nt7.89□□□□□ -1.15
TIS11P47977 MET22YOL064C 1074 nt7.89□□□□□ -1.15
TIS11P47977 YPL108WYPL108W 507 nt7.89□□□□□ -1.15
TIS11P47977 FCY1YPR062W 477 nt7.88□□□□□ -1.15
TIS11P47977 SRM1YGL097W 1449 nt7.87□□□□□ -1.15
TIS11P47977 EMC3YKL207W 762 nt7.87□□□□□ -1.15
TIS11P47977 PET18YCR020C 648 nt7.86□□□□□ -1.15
TIS11P47977 GID7YCL039W 2238 nt7.85□□□□□ -1.15
TIS11P47977 YJL009WYJL009W 327 nt7.85□□□□□ -1.15
TIS11P47977 YMR166CYMR166C 1107 nt7.85□□□□□ -1.15
TIS11P47977 OCH1YGL038C 1443 nt7.85□□□□□ -1.15
TIS11P47977 CAK1YFL029C 1107 nt7.84□□□□□ -1.15
TIS11P47977 BUB2YMR055C 921 nt7.84□□□□□ -1.15
TIS11P47977 LSP1YPL004C 1026 nt7.84□□□□□ -1.15
TIS11P47977 YIR035CYIR035C 765 nt7.83□□□□□ -1.16
TIS11P47977 YJL160CYJL160C 864 nt7.83□□□□□ -1.16
TIS11P47977 ABP1YCR088W 1779 nt7.83□□□□□ -1.16
TIS11P47977 PDC6YGR087C 1692 nt7.83□□□□□ -1.16
TIS11P47977 YLR460CYLR460C 1131 nt7.82□□□□□ -1.16
TIS11P47977 tD(GUC)BtD(GUC)B 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)DtD(GUC)D 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)G1tD(GUC)G1 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)G2tD(GUC)G2 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)I1tD(GUC)I1 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)I2tD(GUC)I2 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)J1tD(GUC)J1 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)J2tD(GUC)J2 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)J3tD(GUC)J3 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)J4tD(GUC)J4 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)KtD(GUC)K 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)L1tD(GUC)L1 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)L2tD(GUC)L2 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)MtD(GUC)M 72 nt7.81□□□□□ -1.16
TIS11P47977 tD(GUC)OtD(GUC)O 72 nt7.81□□□□□ -1.16
TIS11P47977 CHS7YHR142W 951 nt7.81□□□□□ -1.16
TIS11P47977 SHC1YER096W 1539 nt7.8□□□□□ -1.16
TIS11P47977 YMR007WYMR007W 381 nt7.78□□□□□ -1.16
TIS11P47977 LEA1YPL213W 717 nt7.78□□□□□ -1.16
TIS11P47977 FTH1YBR207W 1398 nt7.78□□□□□ -1.16
TIS11P47977 LRO1YNR008W 1986 nt7.78□□□□□ -1.16
TIS11P47977 ESBP6YNL125C 2022 nt7.78□□□□□ -1.16
TIS11P47977 YMR210WYMR210W 1350 nt7.76□□□□□ -1.17
TIS11P47977 RRT14YIL127C 621 nt7.76□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms