Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab5cP35278 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab5cP35278 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.43■□□□□ 0.7
Rab5cP35278 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.42■□□□□ 0.7
Rab5cP35278 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rab5cP35278 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab5cP35278 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab5cP35278 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab5cP35278 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rab5cP35278 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab5cP35278 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab5cP35278 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Rab5cP35278 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab5cP35278 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab5cP35278 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Rab5cP35278 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Rab5cP35278 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rab5cP35278 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab5cP35278 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab5cP35278 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab5cP35278 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rab5cP35278 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Rab5cP35278 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab5cP35278 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab5cP35278 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab5cP35278 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Rab5cP35278 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rab5cP35278 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab5cP35278 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab5cP35278 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.37■□□□□ 0.69
Rab5cP35278 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab5cP35278 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab5cP35278 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab5cP35278 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab5cP35278 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rab5cP35278 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab5cP35278 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab5cP35278 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab5cP35278 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab5cP35278 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab5cP35278 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab5cP35278 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.35■□□□□ 0.69
Rab5cP35278 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rab5cP35278 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab5cP35278 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab5cP35278 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rab5cP35278 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rab5cP35278 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab5cP35278 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rab5cP35278 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab5cP35278 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.32■□□□□ 0.68
Rab5cP35278 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab5cP35278 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rab5cP35278 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab5cP35278 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rab5cP35278 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab5cP35278 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Rab5cP35278 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab5cP35278 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab5cP35278 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.29■□□□□ 0.68
Rab5cP35278 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab5cP35278 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rab5cP35278 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab5cP35278 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rab5cP35278 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rab5cP35278 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.26■□□□□ 0.67
Rab5cP35278 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab5cP35278 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rab5cP35278 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab5cP35278 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab5cP35278 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab5cP35278 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rab5cP35278 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab5cP35278 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab5cP35278 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab5cP35278 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab5cP35278 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab5cP35278 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab5cP35278 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rab5cP35278 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab5cP35278 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab5cP35278 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab5cP35278 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rab5cP35278 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab5cP35278 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rab5cP35278 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab5cP35278 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab5cP35278 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rab5cP35278 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.21■□□□□ 0.67
Rab5cP35278 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rab5cP35278 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab5cP35278 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab5cP35278 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab5cP35278 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.2■□□□□ 0.66
Rab5cP35278 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rab5cP35278 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab5cP35278 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab5cP35278 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rab5cP35278 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab5cP35278 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms