Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
NclP09405 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC35.85■■■■□ 3.33
NclP09405 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
NclP09405 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC35.84■■■■□ 3.33
NclP09405 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC35.84■■■■□ 3.33
NclP09405 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
NclP09405 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
NclP09405 Zxda-201ENSMUST00000117281 2621 ntBASIC35.83■■■■□ 3.33
NclP09405 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
NclP09405 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
NclP09405 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
NclP09405 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC35.81■■■■□ 3.32
NclP09405 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
NclP09405 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
NclP09405 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC35.79■■■■□ 3.32
NclP09405 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC35.79■■■■□ 3.32
NclP09405 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
NclP09405 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC35.78■■■■□ 3.32
NclP09405 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC35.77■■■■□ 3.32
NclP09405 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
NclP09405 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
NclP09405 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC35.75■■■■□ 3.31
NclP09405 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
NclP09405 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC35.72■■■■□ 3.31
NclP09405 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
NclP09405 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC35.72■■■■□ 3.31
NclP09405 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
NclP09405 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
NclP09405 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
NclP09405 AC131739.1-201ENSMUST00000221692 1245 ntBASIC35.69■■■■□ 3.3
NclP09405 Gm6206-201ENSMUST00000133472 2199 ntBASIC35.68■■■■□ 3.3
NclP09405 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
NclP09405 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
NclP09405 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
NclP09405 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
NclP09405 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
NclP09405 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
NclP09405 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC35.64■■■■□ 3.3
NclP09405 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
NclP09405 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC35.62■■■■□ 3.29
NclP09405 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
NclP09405 Gm43445-201ENSMUST00000198564 2091 ntBASIC35.6■■■■□ 3.29
NclP09405 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC35.58■■■■□ 3.29
NclP09405 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC35.58■■■■□ 3.29
NclP09405 Gm9905-201ENSMUST00000065740 1845 ntBASIC35.57■■■■□ 3.28
NclP09405 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC35.56■■■■□ 3.28
NclP09405 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
NclP09405 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC35.56■■■■□ 3.28
NclP09405 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC35.56■■■■□ 3.28
NclP09405 Particl-201ENSMUST00000205370 1560 ntBASIC35.55■■■■□ 3.28
NclP09405 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC35.55■■■■□ 3.28
NclP09405 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC35.54■■■■□ 3.28
NclP09405 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC35.54■■■■□ 3.28
NclP09405 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC35.54■■■■□ 3.28
NclP09405 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
NclP09405 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC35.52■■■■□ 3.28
NclP09405 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
NclP09405 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
NclP09405 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
NclP09405 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC35.48■■■■□ 3.27
NclP09405 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC35.47■■■■□ 3.27
NclP09405 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC35.47■■■■□ 3.27
NclP09405 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC35.47■■■■□ 3.27
NclP09405 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
NclP09405 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC35.46■■■■□ 3.27
NclP09405 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
NclP09405 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC35.46■■■■□ 3.27
NclP09405 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
NclP09405 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC35.45■■■■□ 3.27
NclP09405 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
NclP09405 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
NclP09405 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC35.44■■■■□ 3.26
NclP09405 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
NclP09405 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC35.43■■■■□ 3.26
NclP09405 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
NclP09405 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC35.4■■■■□ 3.26
NclP09405 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
NclP09405 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
NclP09405 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
NclP09405 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
NclP09405 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
NclP09405 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC35.36■■■■□ 3.25
NclP09405 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
NclP09405 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC35.35■■■■□ 3.25
NclP09405 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC35.34■■■■□ 3.25
NclP09405 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
NclP09405 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
NclP09405 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC35.31■■■■□ 3.24
NclP09405 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
NclP09405 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC35.31■■■■□ 3.24
NclP09405 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
NclP09405 AC167019.3-201ENSMUST00000228225 1266 ntBASIC35.29■■■■□ 3.24
NclP09405 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
NclP09405 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC35.28■■■■□ 3.24
NclP09405 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
NclP09405 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC35.26■■■■□ 3.24
NclP09405 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
NclP09405 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
NclP09405 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC35.23■■■■□ 3.23
NclP09405 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms