Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04944 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
P04944 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04944 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04944 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.66■□□□□ 0.58
P04944 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
P04944 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P04944 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.65■□□□□ 0.58
P04944 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.65■□□□□ 0.58
P04944 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04944 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04944 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.64■□□□□ 0.57
P04944 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
P04944 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.63■□□□□ 0.57
P04944 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P04944 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P04944 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04944 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04944 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04944 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04944 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.62■□□□□ 0.57
P04944 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04944 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.61■□□□□ 0.57
P04944 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P04944 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
P04944 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P04944 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P04944 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04944 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04944 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
P04944 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P04944 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04944 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04944 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04944 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P04944 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.59■□□□□ 0.57
P04944 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04944 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.58■□□□□ 0.56
P04944 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
P04944 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04944 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04944 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04944 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04944 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04944 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04944 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
P04944 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
P04944 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
P04944 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04944 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04944 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04944 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
P04944 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04944 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04944 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P04944 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
P04944 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
P04944 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
P04944 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P04944 Gm45855-201ENSMUST00000212546 880 ntBASIC18.53■□□□□ 0.56
P04944 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P04944 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
P04944 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P04944 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
P04944 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
P04944 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04944 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04944 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.48■□□□□ 0.55
P04944 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
P04944 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04944 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P04944 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P04944 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P04944 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04944 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04944 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
P04944 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04944 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.45■□□□□ 0.54
P04944 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.45■□□□□ 0.54
P04944 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P04944 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P04944 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
P04944 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.43■□□□□ 0.54
P04944 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P04944 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P04944 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04944 Gm30023-201ENSMUST00000197970 889 ntBASIC18.42■□□□□ 0.54
P04944 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04944 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
P04944 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P04944 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04944 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
P04944 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.41■□□□□ 0.54
P04944 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P04944 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04944 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
P04944 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.4■□□□□ 0.54
P04944 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
P04944 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
P04944 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms