Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Igh-VJ558P01758 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Igh-VJ558P01758 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Igh-VJ558P01758 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Igh-VJ558P01758 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Igh-VJ558P01758 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Igh-VJ558P01758 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Igh-VJ558P01758 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Igh-VJ558P01758 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Igh-VJ558P01758 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Igh-VJ558P01758 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Igh-VJ558P01758 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Igh-VJ558P01758 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Igh-VJ558P01758 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Igh-VJ558P01758 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Igh-VJ558P01758 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Igh-VJ558P01758 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.83■□□□□ 0.92
Igh-VJ558P01758 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Igh-VJ558P01758 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Igh-VJ558P01758 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Igh-VJ558P01758 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Igh-VJ558P01758 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Igh-VJ558P01758 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igh-VJ558P01758 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igh-VJ558P01758 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Igh-VJ558P01758 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.78■□□□□ 0.92
Igh-VJ558P01758 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Igh-VJ558P01758 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Igh-VJ558P01758 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Igh-VJ558P01758 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Igh-VJ558P01758 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Igh-VJ558P01758 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Igh-VJ558P01758 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igh-VJ558P01758 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Igh-VJ558P01758 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.76■□□□□ 0.91
Igh-VJ558P01758 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Igh-VJ558P01758 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igh-VJ558P01758 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igh-VJ558P01758 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igh-VJ558P01758 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Igh-VJ558P01758 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.75■□□□□ 0.91
Igh-VJ558P01758 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igh-VJ558P01758 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Igh-VJ558P01758 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Igh-VJ558P01758 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Igh-VJ558P01758 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Igh-VJ558P01758 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Igh-VJ558P01758 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Igh-VJ558P01758 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.73■□□□□ 0.91
Igh-VJ558P01758 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igh-VJ558P01758 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igh-VJ558P01758 Gm30023-201ENSMUST00000197970 889 ntBASIC20.72■□□□□ 0.91
Igh-VJ558P01758 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.71■□□□□ 0.91
Igh-VJ558P01758 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Igh-VJ558P01758 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igh-VJ558P01758 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.71■□□□□ 0.91
Igh-VJ558P01758 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Igh-VJ558P01758 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Igh-VJ558P01758 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.7■□□□□ 0.9
Igh-VJ558P01758 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Igh-VJ558P01758 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Igh-VJ558P01758 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Igh-VJ558P01758 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Igh-VJ558P01758 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Igh-VJ558P01758 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Igh-VJ558P01758 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Igh-VJ558P01758 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Igh-VJ558P01758 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
Igh-VJ558P01758 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Igh-VJ558P01758 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Igh-VJ558P01758 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Igh-VJ558P01758 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Igh-VJ558P01758 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Igh-VJ558P01758 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Igh-VJ558P01758 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Igh-VJ558P01758 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Igh-VJ558P01758 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Igh-VJ558P01758 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.66■□□□□ 0.9
Igh-VJ558P01758 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igh-VJ558P01758 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Igh-VJ558P01758 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Igh-VJ558P01758 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Igh-VJ558P01758 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Igh-VJ558P01758 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Igh-VJ558P01758 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Igh-VJ558P01758 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Igh-VJ558P01758 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Igh-VJ558P01758 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.63■□□□□ 0.89
Igh-VJ558P01758 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Igh-VJ558P01758 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Igh-VJ558P01758 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.63■□□□□ 0.89
Igh-VJ558P01758 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Igh-VJ558P01758 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Igh-VJ558P01758 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Igh-VJ558P01758 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Igh-VJ558P01758 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Igh-VJ558P01758 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Igh-VJ558P01758 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Igh-VJ558P01758 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Igh-VJ558P01758 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 732.9 ms