Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Gm45855-201ENSMUST00000212546 880 ntBASIC17.9■□□□□ 0.46
P01739 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01739 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.9■□□□□ 0.46
P01739 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
P01739 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.89■□□□□ 0.45
P01739 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.89■□□□□ 0.45
P01739 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.89■□□□□ 0.45
P01739 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.89■□□□□ 0.45
P01739 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P01739 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
P01739 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01739 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01739 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.88■□□□□ 0.45
P01739 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P01739 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.87■□□□□ 0.45
P01739 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
P01739 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
P01739 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
P01739 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
P01739 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
P01739 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
P01739 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
P01739 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
P01739 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
P01739 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
P01739 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
P01739 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
P01739 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
P01739 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
P01739 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.83■□□□□ 0.44
P01739 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P01739 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P01739 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
P01739 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
P01739 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P01739 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P01739 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P01739 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01739 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01739 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
P01739 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P01739 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01739 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
P01739 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P01739 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P01739 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01739 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01739 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
P01739 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01739 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
P01739 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01739 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.76■□□□□ 0.43
P01739 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.75■□□□□ 0.43
P01739 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01739 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01739 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P01739 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P01739 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01739 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01739 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01739 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P01739 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.73■□□□□ 0.43
P01739 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P01739 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
P01739 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P01739 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
P01739 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
P01739 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
P01739 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
P01739 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P01739 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
P01739 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01739 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01739 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P01739 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01739 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P01739 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01739 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P01739 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
P01739 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
P01739 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01739 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P01739 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
P01739 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01739 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01739 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.68■□□□□ 0.42
P01739 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.68■□□□□ 0.42
P01739 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P01739 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01739 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.67■□□□□ 0.42
P01739 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P01739 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
P01739 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
P01739 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.66■□□□□ 0.42
P01739 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P01739 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
P01739 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01739 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01739 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01739 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms