Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SncaO55042 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SncaO55042 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SncaO55042 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SncaO55042 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SncaO55042 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SncaO55042 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SncaO55042 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SncaO55042 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SncaO55042 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SncaO55042 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SncaO55042 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SncaO55042 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SncaO55042 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.59■□□□□ 0.73
SncaO55042 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SncaO55042 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SncaO55042 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SncaO55042 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SncaO55042 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.57■□□□□ 0.72
SncaO55042 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SncaO55042 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
SncaO55042 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SncaO55042 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SncaO55042 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SncaO55042 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SncaO55042 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SncaO55042 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.55■□□□□ 0.72
SncaO55042 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SncaO55042 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SncaO55042 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SncaO55042 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SncaO55042 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SncaO55042 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SncaO55042 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.53■□□□□ 0.72
SncaO55042 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SncaO55042 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SncaO55042 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.52■□□□□ 0.72
SncaO55042 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SncaO55042 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SncaO55042 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SncaO55042 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SncaO55042 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SncaO55042 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SncaO55042 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SncaO55042 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.49■□□□□ 0.71
SncaO55042 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SncaO55042 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SncaO55042 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SncaO55042 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SncaO55042 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SncaO55042 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SncaO55042 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SncaO55042 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.48■□□□□ 0.71
SncaO55042 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SncaO55042 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaO55042 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaO55042 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SncaO55042 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SncaO55042 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SncaO55042 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SncaO55042 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SncaO55042 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SncaO55042 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.44■□□□□ 0.7
SncaO55042 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SncaO55042 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SncaO55042 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SncaO55042 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SncaO55042 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.44■□□□□ 0.7
SncaO55042 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SncaO55042 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SncaO55042 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SncaO55042 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SncaO55042 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SncaO55042 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SncaO55042 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SncaO55042 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SncaO55042 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SncaO55042 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SncaO55042 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.39■□□□□ 0.69
SncaO55042 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.39■□□□□ 0.69
SncaO55042 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.39■□□□□ 0.69
SncaO55042 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SncaO55042 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SncaO55042 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SncaO55042 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.39■□□□□ 0.69
SncaO55042 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SncaO55042 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SncaO55042 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SncaO55042 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SncaO55042 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SncaO55042 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SncaO55042 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SncaO55042 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
SncaO55042 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SncaO55042 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.36■□□□□ 0.69
SncaO55042 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SncaO55042 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SncaO55042 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SncaO55042 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SncaO55042 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms