Protein–RNA interactions for Protein: O54798

Brs3, Bombesin receptor subtype-3, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brs3O54798 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brs3O54798 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Brs3O54798 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Brs3O54798 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.56■□□□□ 0.72
Brs3O54798 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brs3O54798 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brs3O54798 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brs3O54798 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.55■□□□□ 0.72
Brs3O54798 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Brs3O54798 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Brs3O54798 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.55■□□□□ 0.72
Brs3O54798 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Brs3O54798 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.54■□□□□ 0.72
Brs3O54798 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brs3O54798 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Brs3O54798 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Brs3O54798 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Brs3O54798 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Brs3O54798 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brs3O54798 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brs3O54798 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.51■□□□□ 0.71
Brs3O54798 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.51■□□□□ 0.71
Brs3O54798 Gm7432-201ENSMUST00000210343 879 ntBASIC19.51■□□□□ 0.71
Brs3O54798 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brs3O54798 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brs3O54798 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Brs3O54798 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.5■□□□□ 0.71
Brs3O54798 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Brs3O54798 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brs3O54798 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.5■□□□□ 0.71
Brs3O54798 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brs3O54798 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brs3O54798 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brs3O54798 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Brs3O54798 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brs3O54798 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brs3O54798 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Brs3O54798 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Brs3O54798 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Brs3O54798 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.46■□□□□ 0.71
Brs3O54798 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.45■□□□□ 0.7
Brs3O54798 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.45■□□□□ 0.7
Brs3O54798 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Brs3O54798 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Brs3O54798 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Brs3O54798 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Brs3O54798 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.44■□□□□ 0.7
Brs3O54798 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brs3O54798 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Brs3O54798 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Brs3O54798 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.43■□□□□ 0.7
Brs3O54798 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brs3O54798 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.41■□□□□ 0.7
Brs3O54798 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.41■□□□□ 0.7
Brs3O54798 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brs3O54798 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brs3O54798 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brs3O54798 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.4■□□□□ 0.7
Brs3O54798 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brs3O54798 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brs3O54798 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.4■□□□□ 0.7
Brs3O54798 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.4■□□□□ 0.7
Brs3O54798 Gm30023-201ENSMUST00000197970 889 ntBASIC19.4■□□□□ 0.7
Brs3O54798 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brs3O54798 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brs3O54798 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Brs3O54798 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.39■□□□□ 0.69
Brs3O54798 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brs3O54798 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brs3O54798 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brs3O54798 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.38■□□□□ 0.69
Brs3O54798 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.38■□□□□ 0.69
Brs3O54798 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brs3O54798 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brs3O54798 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brs3O54798 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.37■□□□□ 0.69
Brs3O54798 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brs3O54798 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brs3O54798 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brs3O54798 Gm11599-201ENSMUST00000118720 878 ntBASIC19.37■□□□□ 0.69
Brs3O54798 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brs3O54798 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Brs3O54798 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brs3O54798 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brs3O54798 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Brs3O54798 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brs3O54798 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Brs3O54798 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Brs3O54798 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brs3O54798 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brs3O54798 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
Brs3O54798 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brs3O54798 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brs3O54798 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Brs3O54798 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Brs3O54798 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Brs3O54798 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Brs3O54798 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brs3O54798 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.31■□□□□ 0.68
Brs3O54798 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms