Protein–RNA interactions for Protein: O35173

Kcns1, Potassium voltage-gated channel subfamily S member 1, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcns1O35173 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.24■□□□□ 0.99
Kcns1O35173 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcns1O35173 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcns1O35173 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Kcns1O35173 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcns1O35173 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Kcns1O35173 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcns1O35173 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Kcns1O35173 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.22■□□□□ 0.99
Kcns1O35173 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Kcns1O35173 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Kcns1O35173 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Kcns1O35173 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kcns1O35173 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Kcns1O35173 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.2■□□□□ 0.98
Kcns1O35173 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.2■□□□□ 0.98
Kcns1O35173 Gm9397-201ENSMUST00000200125 605 ntBASIC21.2■□□□□ 0.98
Kcns1O35173 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.2■□□□□ 0.98
Kcns1O35173 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Kcns1O35173 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Kcns1O35173 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.19■□□□□ 0.98
Kcns1O35173 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.19■□□□□ 0.98
Kcns1O35173 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Kcns1O35173 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Kcns1O35173 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Kcns1O35173 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.18■□□□□ 0.98
Kcns1O35173 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Kcns1O35173 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.17■□□□□ 0.98
Kcns1O35173 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Kcns1O35173 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Kcns1O35173 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Kcns1O35173 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Kcns1O35173 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.16■□□□□ 0.98
Kcns1O35173 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Kcns1O35173 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Kcns1O35173 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kcns1O35173 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kcns1O35173 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kcns1O35173 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kcns1O35173 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kcns1O35173 Gm24970-201ENSMUST00000175582 82 ntBASIC21.12■□□□□ 0.97
Kcns1O35173 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Kcns1O35173 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Kcns1O35173 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.11■□□□□ 0.97
Kcns1O35173 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Kcns1O35173 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Kcns1O35173 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Kcns1O35173 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Kcns1O35173 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Kcns1O35173 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Kcns1O35173 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Kcns1O35173 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Kcns1O35173 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Kcns1O35173 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Kcns1O35173 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Kcns1O35173 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Kcns1O35173 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.07■□□□□ 0.96
Kcns1O35173 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.07■□□□□ 0.96
Kcns1O35173 Gm45855-201ENSMUST00000212546 880 ntBASIC21.06■□□□□ 0.96
Kcns1O35173 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Kcns1O35173 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.04■□□□□ 0.96
Kcns1O35173 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Kcns1O35173 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Kcns1O35173 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Kcns1O35173 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Kcns1O35173 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.03■□□□□ 0.96
Kcns1O35173 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.03■□□□□ 0.96
Kcns1O35173 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Kcns1O35173 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kcns1O35173 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kcns1O35173 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.01■□□□□ 0.95
Kcns1O35173 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kcns1O35173 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Kcns1O35173 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kcns1O35173 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kcns1O35173 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Kcns1O35173 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Kcns1O35173 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Kcns1O35173 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21■□□□□ 0.95
Kcns1O35173 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kcns1O35173 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kcns1O35173 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Kcns1O35173 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Kcns1O35173 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Kcns1O35173 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Kcns1O35173 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Kcns1O35173 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Kcns1O35173 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kcns1O35173 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kcns1O35173 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kcns1O35173 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Kcns1O35173 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Kcns1O35173 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Kcns1O35173 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Kcns1O35173 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Kcns1O35173 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Kcns1O35173 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Kcns1O35173 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Kcns1O35173 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Kcns1O35173 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms